LOCUS BC117403 3186 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens caspase recruitment domain family, member 10, mRNA
(cDNA clone MGC:151012 IMAGE:40125954), complete cds.
ACCESSION BC117403
VERSION BC117403.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: M Column: 3.
FEATURES Location/Qualifiers
source 1..3186
/db_xref="H-InvDB:HIT000387693"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:151012 IMAGE:40125954"
/tissue_type="Liver, PCR rescued clones"
/clone_lib="NIH_MGC_291"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TAGAAGGG"
gene 1..3186
/gene="CARD10"
/gene_synonym="BIMP1"
/gene_synonym="CARMA3"
/db_xref="GeneID:29775"
/db_xref="HGNC:HGNC:16422"
/db_xref="MIM:607209"
CDS 22..3114
/gene="CARD10"
/gene_synonym="BIMP1"
/gene_synonym="CARMA3"
/codon_start=1
/product="caspase recruitment domain family, member 10"
/protein_id="AAI17404.1"
/db_xref="GeneID:29775"
/db_xref="HGNC:HGNC:16422"
/db_xref="MIM:607209"
/translation="MPGRAEAGEAEEEAGAGSGSEAEEDALWERIEGVRHRLARALNP
AKLTPYLRQCRVIDEQDEEEVLSTYRFPCRVNRTGRLMDILRCRGKRGYEAFLEALEF
YYPEHFTLLTGQEPAQRCSMILDEEGPEGLTQFLMTEVRRLREARKSQLQREQQLQAR
GRVLEEERAGLEQRLRDQQQAQERCQRLREDWEAGSLELLRLKDENYMIAMRLAQLSE
EKNSAVLRSRDLQLAVDQLKLKVSRLEEECALLRRARGPPPGAEEKEKEKEKEPDNVD
LVSELRAENQRLTASLRELQEGLQQEASRPGAPGSERILLDILEHDWREAQDSRQELC
QKLHAVQGELQWAEELRDQYLQEMEDLRLKHRTLQKDCDLYKHRMATVLAQLEEIEKE
RDQAIQSRDRIQLQYSQSLIEKDQYRKQVRGLEAERDELLTTLTSLEGTKALLEVQLQ
RAQGGTCLKACASSHSLCSNLSSTWSLSEFPSPLGGPEATGEAAVMGGPEPHNSEEAT
DSEKEINRLSILPFPPSAGSILRRQREEDPAPPKRSFSSMSDITGSVTLKPWSPGLSS
SSSSDSVWPLGKPEGLLARGCGLDFLNRSLAIRVSGRSPPGGPEPQDKGPDGLSFYGD
RWSGAVVRRVLSGPGSARMEPREQRVEAAGLEGACLEAEAQQRTLLWNQGSTLPSLMD
SKACQSFHEALEAWAKGPGAEPFYIRANLTLPERADPHALCVKAQEILRLVDSAYKRR
QEWFCTRVDPLTLRDLDRGTVPNYQRAQQLLEVQEKCLPSSRHRGPRSNLKKRALDQL
RLVRPKPVGAPAGDSPDQLLLEPCAEPERSLRPYSLVRPLLVSALRPVVLLPECLAPR
LIRNLLDLPSSRLDFQVCPAESLSGEELCPSSAPGAPKAQPATPGLGSRIRAIQESVG
KKHCLLELGARGVRELVQNEIYPIVIHVEVTEKNVREVRGLLGRPGWRDSELLRQCRG
SEQVLWGLPCSWVQVPAHEWGHAEELAKVVRGRILQEQARLVWVECGSSRGCPSSSEA
"
BASE COUNT 599 a 968 c 1124 g 495 t
ORIGIN
1 gcagaccctg aggacacggc catgccgggc cgggcggagg cgggggaggc cgaggaggag
61 gccggggccg gctcggggtc tgaagcggag gaggacgcgc tgtgggagcg aatcgagggc
121 gtccggcacc ggctggctcg cgccctgaac ccggccaagc tcacgccgta tctgcgccag
181 tgccgggtca tcgacgagca ggacgaggag gaggtgctga gcacctaccg cttcccgtgc
241 cgcgtcaacc gcaccgggcg cctgatggac atcttgcgct gccgtggcaa gaggggctat
301 gaggccttcc tggaagccct ggagttctac taccccgaac acttcacgct gctcacgggc
361 caggaacccg cccagcgctg ctccatgatc ctcgatgagg aggggcctga gggcctgacc
421 caattcttga tgacagaggt gcgacggctg cgggaagctc gcaagagcca gctgcagcgg
481 gagcagcaac tgcaggcccg gggccgggtg ctcgaggagg agcgggcagg gctggagcag
541 cggctgcggg accagcagca ggctcaggag cgctgtcaac ggctgcggga ggactgggag
601 gcgggcagcc tggagctgct gcggctcaag gatgagaact acatgatcgc catgcgcctg
661 gcacagctca gtgaggagaa gaactcggct gtacttcgca gccgtgacct gcagctggcg
721 gtggatcagc tcaagctcaa agtgagtcgg ctggaggaag agtgtgcact gcttcgaagg
781 gccaggggcc cgccccctgg ggcagaggag aaggagaagg agaaggagaa ggagccagac
841 aatgtggacc ttgtctctga gctgcgtgct gagaaccagc ggctgacggc gtcactgcgg
901 gagttgcagg agggcctgca gcaggaggcg agccggccgg gggccccggg ctccgagcgc
961 atcctgctgg acatcctaga gcatgactgg cgggaggcgc aggacagcag gcaggagctg
1021 tgccagaagc tgcatgccgt gcagggggag ctgcagtggg ccgaggagct gcgcgaccag
1081 tacctgcagg agatggaaga cctgcggctc aagcaccgca cgctgcagaa ggactgtgac
1141 ctgtacaagc accgcatggc cactgtcctg gcccaactgg aggagattga gaaggagcga
1201 gaccaggcca tccagagccg tgaccggatc cagttgcagt actcacagag cctcatcgag
1261 aaggaccagt accgcaagca ggtgcggggc ctggaggcgg agcgggatga gctgctgaca
1321 acgctcacca gcctggaggg caccaaggct ctgctggagg ttcagctgca gcgggcccag
1381 ggtggcacct gcctcaaggc ctgtgcctcc tcccattccc tgtgctccaa cctcagcagc
1441 acttggagcc tgagcgagtt cccctcccct ctgggaggcc cagaagcaac tggggaggca
1501 gctgtcatgg ggggacctga gcctcacaac tcggaggaag ccacagacag tgaaaaggag
1561 atcaatcggc tctccatcct gcccttcccc cccagtgccg gctccatcct ccgccggcag
1621 cgtgaggaag accccgcacc ccctaagaga tccttcagca gcatgtcaga catcacaggg
1681 agtgtgacac ttaagccctg gtcccctggc ctctcttcgt cctcatcctc tgacagcgtg
1741 tggcctttgg gaaagccgga aggcctcctg gctcggggct gtggcctgga cttcctcaac
1801 aggtctctgg ctattcgggt gtctggccgg agccccccag ggggcccaga gccgcaggac
1861 aagggaccag atggactgtc gttttatggg gacagatggt ctggggctgt ggtgcgcagg
1921 gtgctgtctg ggcctgggtc cgccaggatg gaaccaagag agcaaagggt ggaagctgct
1981 ggtctggagg gggcgtgcct ggaagccgag gcccagcaga gaaccttgct ctggaatcag
2041 gggtccacac tcccctccct gatggactcg aaggcctgcc agtccttcca cgaggcccta
2101 gaagcctggg caaagggacc aggtgccgag cccttctaca ttcgtgccaa cctcaccttg
2161 cctgagaggg cagatcccca tgccctttgc gtgaaagccc aagagatcct tcgactggtg
2221 gactcggcat acaagcggag gcaggaatgg ttctgcaccc gggttgaccc cctcactctg
2281 cgggacctgg accggggcac cgtgcccaat tatcagagag cccagcagct cctagaagtt
2341 caggagaaat gcctgccctc cagccggcac cgaggccccc gcagtaatct gaagaagaga
2401 gccctggacc agctgcggct ggtgaggccc aagcccgtgg gggcgcctgc aggggactcc
2461 ccggatcagc tgctgctgga gccctgtgca gagccggagc ggagcctcag accctacagt
2521 ttggtgcggc cgctactggt gtctgccctg cggcccgtgg tgctgttgcc tgagtgcctg
2581 gcgccccggc tcatccgtaa cctgctagac ctgcccagct cccggctgga cttccaagtg
2641 tgcccagcgg aaagcctctc tggggaggaa ctgtgcccat cctcagcgcc tggagccccc
2701 aaggctcagc ctgccacccc tgggctaggc agcaggatcc gggccatcca ggagtctgtt
2761 gggaagaagc actgcctgct ggagctgggt gctcggggtg tgcgggagct ggtgcagaac
2821 gagatctacc ccatcgtcat ccacgtggag gtgactgaga agaatgtccg ggaagtcagg
2881 ggtctgctgg gccggccggg ctggcgggac tcagagctgc tgcggcagtg ccgtggctca
2941 gagcaggtgc tctgggggct gccctgctcc tgggtgcagg tgcccgccca tgagtgggga
3001 cacgcagagg agctggccaa ggtggtgcgc ggccgcatcc tgcaggagca ggcccgcctc
3061 gtgtgggtgg agtgcggcag cagcagaggc tgccccagca gcagtgaggc ctgaggctca
3121 tctgatacct gcaccttctc cccaagccag cgtggaccct ggtgtctatg gtgaagctgg
3181 gccctc
//