LOCUS BC117311 2800 bp mRNA linear HUM 26-JUN-2006 DEFINITION Homo sapiens calcium/calmodulin-dependent serine protein kinase (MAGUK family), mRNA (cDNA clone MGC:150920 IMAGE:40125862), complete cds. ACCESSION BC117311 VERSION BC117311.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2800) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2800) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 6 Row: I Column: 7. FEATURES Location/Qualifiers source 1..2800 /db_xref="H-InvDB:HIT000387601" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:150920 IMAGE:40125862" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: GTGTTAGT" gene 1..2800 /gene="CASK" /gene_synonym="LIN2" /db_xref="GeneID:8573" /db_xref="HGNC:HGNC:1497" /db_xref="MIM:300172" CDS 20..2716 /gene="CASK" /gene_synonym="LIN2" /codon_start=1 /product="CASK protein" /protein_id="AAI17312.1" /db_xref="GeneID:8573" /db_xref="HGNC:HGNC:1497" /db_xref="MIM:300172" /translation="MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVD VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL GGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP FYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL KERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSED PTSSGLLAAERAVSQVLDSLEEIHALTDCSEKDLDFLHSVFQDQHLHTLLDLYDKINT KSSPQIRNPPSDAVQRAKEVLEEISCYPENNDAKELKRILTQPHFMALLQTHDVVAHE VYSDEALRVTPPPTSPYLNGDSPESANGDMDMENVTRVRLVQFQKNTDEPMGITLKMN ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK IVPSYRTQSSSCEDLPSTTQPKGRQIYVRAQFEYDPAKDDLIPCKEAGIRFRVGDIIQ IISKDDHNWWQGKLENSKNGTAGLIPSPELQEWRVACIAMEKTKQEQQASCTWFGKKK KQYKDKYLAKHNADLVTYEEVVKLPAFKRKTLVLLGAHGVGRRHIKNTLITKHPDRFA YPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMYGTKLETIRKI HEQGLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLNEDESLQRLQKESDILQR TYAHYFDLTIINNEIDETIRHLEEAVELVCTAPQWVPVSWVY" BASE COUNT 860 a 595 c 664 g 681 t ORIGIN 1 ccgctatccc ctccggacca tggccgacga cgacgtgctg ttcgaggatg tgtacgagct 61 gtgcgaggtg atcggaaagg gtcccttcag tgttgtacga cgatgtatca acagagaaac 121 tgggcaacaa tttgctgtaa aaattgttga tgtagccaag ttcacatcaa gtccagggtt 181 aagtacagaa gatctaaagc gggaagccag tatctgtcat atgctgaaac atccacacat 241 tgtagagtta ttggagacat atagctcaga tggaatgctt tacatggttt tcgaatttat 301 ggatggagca gatctgtgtt ttgaaatcgt aaagcgagct gacgctggtt ttgtgtacag 361 tgaagctgta gccagccatt atatgagaca gatactggaa gctctacgct actgccatga 421 taataacata attcacaggg atgtgaagcc ccactgtgtt ctccttgcct caaaagaaaa 481 ctcggcacct gttaaacttg gaggctttgg ggtagctatt caattagggg agtctggact 541 tgtagctgga ggacgtgttg gaacacctca ttttatggca ccagaagtgg tcaaaagaga 601 gccttacgga aagcctgtag acgtctgggg gtgcggtgtg atccttttta tcctgctcag 661 tggttgtttg cctttttacg gaaccaagga aagattgttt gaaggcatta ttaaaggaaa 721 atataagatg aatccaaggc agtggagcca tatctctgaa agtgccaaag acctagtacg 781 tcgcatgctg atgctggatc cagctgaaag gatcactgtt tatgaagcac tgaatcaccc 841 atggcttaag gagcgggatc gttacgccta caagattcat cttccagaaa cagtagagca 901 gctgaggaaa ttcaatgcaa ggaggaaact aaagggtgca gtactagccg ctgtgtcaag 961 tcacaaattc aactcattct atggggatcc ccctgaagag ttaccagatt tctccgaaga 1021 ccctacctcc tcaggacttc tagcagcaga aagagcagtc tcacaggtgc tggacagcct 1081 ggaagagatt catgcgctta cagactgcag tgaaaaggac ctagattttc tacacagtgt 1141 tttccaggat cagcatcttc acacactact agatctgtat gacaaaatta acacaaagtc 1201 ttcaccacaa atcaggaatc ctccaagcga tgcagtacag agagccaaag aggtattgga 1261 agaaatttca tgttaccctg agaataacga cgcaaaggaa ctaaagcgta ttttaacaca 1321 acctcatttc atggccttac ttcagactca cgacgtagtg gcacatgaag tttacagtga 1381 tgaagcattg agggtcacac ctcctcccac ctctccctat ttaaacggcg attctccaga 1441 aagtgctaac ggagacatgg atatggagaa tgtgaccaga gttcggctgg tacagtttca 1501 aaagaacaca gatgaaccaa tgggaatcac tttaaaaatg aatgaactaa atcattgtat 1561 tgttgcaaga attatgcatg ggggcatgat tcacaggcaa ggtacacttc atgttggtga 1621 tgaaattcga gaaatcaatg gcatcagtgt ggctaaccaa acagtggaac aactgcaaaa 1681 aatgcttagg gaaatgcggg ggagtattac cttcaagatt gtgccaagtt accgcactca 1741 gtcttcgtcc tgtgaggact tgccatcaac tacccaacca aaaggacgac agatctatgt 1801 aagagcacaa tttgaatatg atccagccaa ggatgacctc atcccctgta aagaagctgg 1861 cattcgattc agagttggtg acatcatcca gattattagt aaggatgatc ataattggtg 1921 gcagggtaaa ctggaaaact ccaaaaatgg aactgcaggt ctcattcctt ctcctgaact 1981 tcaggaatgg cgagtagctt gcattgccat ggagaagacc aaacaggagc agcaggccag 2041 ctgtacttgg tttggcaaga aaaagaagca gtacaaagat aaatatttgg caaagcacaa 2101 tgcagatctt gtcacatatg aagaagtagt aaaactgcca gcattcaaga ggaaaacact 2161 agtcttatta ggcgcacatg gtgttgggag aagacacata aaaaacactc tcatcacaaa 2221 gcacccagac cggtttgcgt accctattcc acatacaacc agacctccaa agaaagacga 2281 agaaaatgga aagaattatt actttgtatc tcatgaccaa atgatgcaag acatctctaa 2341 taacgagtac ttggagtacg gcagccacga ggatgcgatg tatgggacaa aactggagac 2401 catccggaag atccacgagc aggggctgat tgcaatactg gacgtggagc ctcaggcact 2461 gaaggtcctg agaactgcag agtttgctcc ttttgttgtt ttcattgctg caccaactat 2521 tactccaggt ttaaatgagg atgaatctct tcagcgtctg cagaaggagt ctgacatctt 2581 acagagaaca tatgcacact acttcgatct cacaattatc aacaatgaaa ttgatgagac 2641 aatcagacat ctggaggaag ctgttgagct cgtgtgcaca gccccacagt gggtccctgt 2701 ctcctgggtc tattaggcct ctccccagat atctgagcat aactgggagc acctcatttg 2761 tggaaaagcc tctttgttat cggccttgtg tcagcaggtc //