LOCUS BC117292 800 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens interferon, omega 1, mRNA (cDNA clone MGC:150901
IMAGE:40125843), complete cds.
ACCESSION BC117292
VERSION BC117292.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 800)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 800)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: H Column: 12.
FEATURES Location/Qualifiers
source 1..800
/db_xref="H-InvDB:HIT000387582"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150901 IMAGE:40125843"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CTCGAACA"
gene 1..800
/gene="IFNW1"
/db_xref="GeneID:3467"
/db_xref="HGNC:HGNC:5448"
/db_xref="MIM:147553"
CDS 38..625
/gene="IFNW1"
/codon_start=1
/product="interferon, omega 1"
/protein_id="AAI17293.1"
/db_xref="GeneID:3467"
/db_xref="HGNC:HGNC:5448"
/db_xref="MIM:147553"
/translation="MALLFPLLAALVMTSYSPVGSLGCDLPQNHGLLSRNTLVLLHQM
RRISPFLCLKDRRDFRFPQEMVKGSQLQKAHVMSVLHEMLQQIFSLFHTERSSAAWNM
TLLDQLHTGLHQQLQHLETCLLQVVGEGESAGAISSPALTLRRYFQGIRVYLKEKKYS
DCAWEVVRMEIMKSLFLSTNMQERLRSKDRDLGSS"
BASE COUNT 217 a 200 c 182 g 201 t
ORIGIN
1 cccagctcag taaagccagg agcatcctca tttcccaatg gccctcctgt tccctctact
61 ggcagcccta gtgatgacca gctatagccc tgttggatct ctgggctgtg atctgcctca
121 gaaccatggc ctacttagca ggaacacctt ggtgcttctg caccaaatga ggagaatctc
181 ccctttcttg tgtctcaagg acagaagaga cttcaggttc ccccaggaga tggtaaaagg
241 gagccagttg cagaaggccc atgtcatgtc tgtcctccat gagatgctgc agcagatctt
301 cagcctcttc cacacagagc gctcctctgc tgcctggaac atgaccctcc tagaccaact
361 ccacactgga cttcatcagc aactgcaaca cctggagacc tgcttgctgc aggtagtggg
421 agaaggagaa tctgctgggg caattagcag ccctgcactg accttgagga ggtacttcca
481 gggaatccgt gtctacctga aagagaagaa atacagcgac tgtgcctggg aagttgtcag
541 aatggaaatc atgaaatcct tgttcttatc aacaaacatg caagaaagac tgagaagtaa
601 agatagagac ctgggctcat cttgaaatga ttctcattga ttaatttgcc atataacact
661 tgcacatgtg actctggtca attcaaaaga ctcttatttc ggctttaatc acagaattga
721 ctgaattagt tctgcaaata ctttgtcggt atattaagcc agtatatgtt aaaaagactt
781 aggttcaggg gcatcagtcc
//