LOCUS BC117262 2611 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens TNNI3 interacting kinase, mRNA (cDNA clone MGC:150871
IMAGE:40125813), complete cds.
ACCESSION BC117262
VERSION BC117262.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2611)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2611)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: G Column: 6.
FEATURES Location/Qualifiers
source 1..2611
/db_xref="H-InvDB:HIT000387552"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150871 IMAGE:40125813"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GCTGGGGC"
gene 1..2611
/gene="TNNI3K"
/gene_synonym="CARK"
/db_xref="GeneID:51086"
/db_xref="HGNC:HGNC:19661"
CDS 40..2547
/gene="TNNI3K"
/gene_synonym="CARK"
/codon_start=1
/product="TNNI3 interacting kinase"
/protein_id="AAI17263.1"
/db_xref="GeneID:51086"
/db_xref="HGNC:HGNC:19661"
/translation="MGNYKSRPTQTCTDEWKKKVSESYVITIERLEDDLQIKEKELTE
LRNIFGSDEAFSKVNLNYRTENGLSLLHLCCICGGKKSHIRTLMLKGLRPSRLTRNGF
TALHLAVYKDNAELITSLLHSGADIQQVGYGGLTALHIATIAGHLEAADVLLQHGANV
NIQDAVFFTPLHIAAYYGHEQVTRLLLKFGADVNVSGEVGDRPLHLASAKGFLNIAKL
LMEEGSKADVNAQDNEDHVPLHFCSRFGHHDIVKYLLQSDLEVQPHVVNIYGDTPLHL
ACYNGKFEVAKEIIQISGTESLTKENIFSETAFHSACTYGKSIDLVKFLLDQNVININ
HQGRDGHTGLHSACYHGHIRLVQFLLDNGADMNLVACDPSRSSGEKDEQTCLMWAYEK
GHDAIVTLLKHYKRPQDELPCNEYSQPGGDGSYVSVPSPLGKIKSMTKEKADILLLRA
GLPSHFHLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCR
EVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLII
AVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQ
PGNLRWMAPEVFTQCTRYTIKADVFSYALCLWEILTGEIPFAHLKPAAAAADMAYHHI
RPPIGYSIPKPISSLLIRGWNACPEGRPEFSEVVMKLEECLCNIELMSPASSNSSGSL
SPSSSSDCLVNRGGPGRSHVAALRSRFELEYALNARSYAALSQSAGQYSSQGLSLEEM
KRSLQYTPIDKYGYVSDPMSSMHFHSCRNSSSFEDSS"
BASE COUNT 758 a 556 c 577 g 720 t
ORIGIN
1 tgaagaactg ccctggagaa aggaagaaac ttataataaa tgggaaatta taaatctaga
61 ccaacccaaa cttgtactga tgaatggaag aaaaaagtca gtgaatcata tgttatcaca
121 atagaaagat tagaagatga cctgcagatc aaggaaaaag aactgacaga actaaggaat
181 atatttggct ctgatgaagc cttcagtaaa gtcaatttaa attaccgcac tgaaaatggg
241 ctgtctctac ttcatttatg ttgcatttgt ggaggcaaga aatcacatat tcgaactctt
301 atgttgaaag ggctccgccc atctcgactg acaagaaatg gatttacagc cttgcattta
361 gcagtttaca aggataatgc agaattgatc acttctctgc ttcacagtgg agctgatata
421 cagcaggttg gatacggtgg cctcactgcc ctccatattg ctacaatagc tggccaccta
481 gaggctgctg atgtgctgtt gcaacatgga gctaatgtca atattcaaga tgcagttttt
541 ttcactccat tgcatattgc agcgtactat ggacatgaac aggtaactcg ccttcttttg
601 aaatttggtg ctgatgtaaa tgtaagtggt gaagttggag atagacccct ccacctagca
661 tctgcaaaag gattcttgaa tattgcaaaa ctcttgatgg aagaaggcag caaagcagat
721 gtgaatgctc aagataatga agaccatgtc ccactccatt tctgttctcg atttggacac
781 catgatatag ttaagtatct gctgcaaagt gatttggaag ttcaacctca tgttgttaat
841 atctatggag ataccccctt acacctggca tgctacaatg gcaaatttga agttgccaag
901 gaaatcatcc aaatatcagg aacagaaagt ctgactaagg aaaacatctt cagtgaaaca
961 gcttttcata gtgcttgtac ctatggcaag agcattgacc tagtcaaatt tcttcttgat
1021 cagaatgtca taaacatcaa ccaccaagga agggatgggc acactggatt acactctgct
1081 tgctaccacg gtcacattcg cctggttcag ttcttactgg ataatggagc tgatatgaat
1141 ctagtggctt gtgatcccag caggtctagt ggtgaaaaag atgagcagac atgtttgatg
1201 tgggcttatg aaaaagggca tgatgccatt gtcacactcc tgaagcatta taagagacca
1261 caagatgaat tgccctgtaa tgaatattct cagcctggag gagatggctc ctatgtgtct
1321 gttccatcac ccttggggaa gattaaaagc atgacaaaag agaaggcaga tattctcctc
1381 ctaagagctg gattgccttc acatttccat cttcagctct cagaaattga gttccatgag
1441 attattggct caggttcttt tgggaaagta tataaaggac gatgcagaaa taaaatagtg
1501 gctataaaac gttatcgagc caatacctac tgctccaagt cagatgtgga tatgttttgc
1561 cgagaggtgt ccattctctg ccagctcaat catccctgcg taattcagtt tgtgggtgct
1621 tgcttgaatg atcccagcca gtttgccatt gtcactcaat acatatcagg gggttctctg
1681 ttctccctcc ttcatgagca gaagaggatt cttgatttgc agtctaaatt aattattgca
1741 gtagatgttg ccaaaggcat ggagtacctt cacaacctga cacagccaat tatacatcgt
1801 gacttgaaca gtcacaatat tcttctctat gaggatgggc atgctgtggt ggcagatttt
1861 ggagaatcaa gatttctaca gtctctggat gaagacaaca tgacaaaaca acctgggaac
1921 ctccgttgga tggctcctga ggtgttcacg cagtgcactc ggtacaccat caaagcagat
1981 gtcttcagct atgctctgtg tctgtgggaa attctcactg gcgaaattcc attcgctcat
2041 ctcaagccag cggctgcggc agcagacatg gcttaccacc acatcagacc tcccattggc
2101 tattccattc ccaagcccat atcatctctg ctgatacgag ggtggaacgc atgtcctgaa
2161 ggaagacccg aattttctga agttgtcatg aagttagaag agtgtctctg caacattgag
2221 ctgatgtctc ctgcatcaag taacagcagt gggtctctct caccttcttc ttcttctgat
2281 tgcctggtga accggggagg acctggccgg agtcatgtgg cagcattaag aagtcgtttc
2341 gaattggaat atgctctaaa tgcaaggtcc tatgctgctt tgtcccaaag tgctggacaa
2401 tattcctctc aaggtctgtc tttggaggag atgaaaagaa gtcttcaata cacacccatt
2461 gacaaatatg gctatgtatc cgatcccatg agctcaatgc attttcattc ttgccgaaat
2521 agtagcagct ttgaggacag cagctgacag cattcggcgt atacctaagg agagtttttt
2581 ccccgaactg acagcaacga ttccaaccac g
//