LOCUS BC117239 789 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens RAB41, member RAS oncogene family, mRNA (cDNA clone
MGC:150848 IMAGE:40125790), complete cds.
ACCESSION BC117239
VERSION BC117239.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 789)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 789)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: F Column: 7.
FEATURES Location/Qualifiers
source 1..789
/db_xref="H-InvDB:HIT000387529"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150848 IMAGE:40125790"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ACTCAAGG"
gene 1..789
/gene="RAB41"
/db_xref="GeneID:347517"
/db_xref="HGNC:HGNC:18293"
CDS 47..712
/gene="RAB41"
/codon_start=1
/product="RAB41, member RAS oncogene family"
/protein_id="AAI17240.1"
/db_xref="GeneID:347517"
/db_xref="HGNC:HGNC:18293"
/translation="MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQSGKT
SIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRD
STIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEE
KSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRTSPPPKEGTVEIELESFEESGNR
SYC"
BASE COUNT 209 a 182 c 200 g 198 t
ORIGIN
1 caggctgagc gttggaagcc attttggctg cagcctacct gaagcgatgt ctgcctttgg
61 tcacgacgag gcctggatgg aggccggagg ctttggtctg gaggctgccg aaagaacgga
121 ataccagtct ctgtgcaaat ctaaactctt attcctggga gagcagagcg ggaagacatc
181 catcatcagc cgcttcatgt acaacagctt cggctgcgcc tgccaggcaa ctgttggaat
241 tgacttcttg tctaagacca tgtacttgga ggaccaaata gttcagctgc agctatggga
301 cacagctggc caggagcgct ttcacagcct aattcctagc tacattcgtg attcaactat
361 tgcagtggtt gtctatgaca ttacaaacat caattctttt aaggagacag ataagtgggt
421 agaacacgtg cgagcagaaa gaggtgacga tgttgtcatc atgttgttgg gtaacaagat
481 tgatttggat aacaaaagac aagtcactgc agaacagggt gaagaaaaat ccagaaacct
541 caatgtgatg tttattgaga ccagtgccaa aaccggttac aacgtgaaaa agctgttccg
601 gcgtgtggct tctgcccttc tttccacaag gacttcacct ccaccaaaag aggggacggt
661 tgaaatcgaa ctggaatcct tcgaggagtc aggcaacaga agctattgtt gacagcttag
721 gctttctctg cctcatttga tggatttctt acatttgggc ttgccatacc agttctcctc
781 cccacctcg
//