LOCUS BC117221 3713 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens SEC31 homolog A (S. cerevisiae), mRNA (cDNA clone
MGC:150830 IMAGE:40125772), complete cds.
ACCESSION BC117221
VERSION BC117221.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3713)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3713)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: E Column: 13.
FEATURES Location/Qualifiers
source 1..3713
/db_xref="H-InvDB:HIT000387511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150830 IMAGE:40125772"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CATAATAC"
gene 1..3713
/gene="SEC31A"
/gene_synonym="ABP125"
/gene_synonym="ABP130"
/gene_synonym="HSPC275"
/gene_synonym="HSPC334"
/gene_synonym="KIAA0905"
/db_xref="GeneID:22872"
/db_xref="HGNC:HGNC:17052"
/db_xref="MIM:610257"
CDS 66..3683
/gene="SEC31A"
/gene_synonym="ABP125"
/gene_synonym="ABP130"
/gene_synonym="HSPC275"
/gene_synonym="HSPC334"
/gene_synonym="KIAA0905"
/codon_start=1
/product="SEC31 homolog A (S. cerevisiae)"
/protein_id="AAI17222.1"
/db_xref="GeneID:22872"
/db_xref="HGNC:HGNC:17052"
/db_xref="MIM:610257"
/translation="MKLKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLE
IFELDLSDPSLDMKSCATFSSSHRYHKLIWGPYKMDSKGDVSGVLIAGGENGNIILYD
PSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATPMT
PGAKTQPPEDISCIAWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSG
LAWHPDVATQMVLASEDDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELL
LSCGKDAKILCSNPNTGEVLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIM
GGSTDGLRQKQVDKLSSSFGNLDPFGTGQPLPPLQIPQQTAQHSIVLPLKKPPKWIRR
PVGASFSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSRSDQLQQAVQ
SQGFINYCQKKIDASQTEFEKNVWSFLKVNFEDDSRGKYLELLGYRKEDLGKKIALAL
NKVDGANVALKDSDQVAQSDGEESPAAEEQLLGEHIKEEKEESEFLPSSGGTFNISVS
GDIDGLITQALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLARTQKKYFAKSQSK
ITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYAKPDEFSALCDLLGTRLENEGDS
LLQTQACLCYICAGNVEKLVACWTKAQDGSHPLSLQDLIEKVVILRKAVQLTQAMDTS
TVGVLLAAKMSQYANLLAAQGSIAAALAFLPDNTNQPNIMQLRDRLCRAQGEPVAGHE
SPKIPYEKQQLPKGRPGPVAGHHQMPRVQTQQYYPHGENPPPPGFIMHGNVNPNAAGQ
LPTSPGHMHTQVPPYPQPQPYQPAQPYPFGTGGSAMYRPQQPVAPPTSNAYPNTPYIS
SASSYTGQSQLYAAQHQASSPTSSPATSFPPPPSSGASFQHGGPGAPPSSSAYALPPG
TTGPQNGWNDPPALNRVPKKKKMPENFMPPVPITSPIMNPLGDPQSQMLQQQPSAPVP
LSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAPIGNTFQHVQSLP
TKKITKKPIPDEHLILKTTFEDLIQRCLSSATDPQTKRKLDDASKRLEFLYDKLREQT
LSPTITSGLHNIARSIETRNYSEGLTMHTHIVSTSNFSETSAFMPVLKVVLTQANKLG
V"
BASE COUNT 1036 a 915 c 821 g 941 t
ORIGIN
1 ctgggagagt ccgacgagcg ctgcactaac gcaggatccg gctgccgaag gtcctcgcca
61 gcaggatgaa gttaaaggaa gtagatcgta cagccatgca ggcatggagc cctgcccaga
121 atcaccccat ttacctagca acaggaacat ctgctcagca attggatgca acatttagta
181 cgaatgcttc ccttgagata tttgaattag acctctctga tccatccttg gatatgaaat
241 cttgtgccac attctcctct tctcacaggt accacaagtt gatttggggg ccttataaaa
301 tggattccaa aggagatgtc tctggagttc tgattgcagg tggtgaaaat ggaaatatta
361 ttctctatga tccttctaaa attatagctg gagacaagga agttgtgatt gcccagaatg
421 acaagcatac tggcccagtg agagccttgg atgtgaacat tttccagact aatctggtag
481 cttctggtgc taatgaatct gaaatctaca tatgggatct aaataatttt gcaaccccaa
541 tgacaccagg agccaaaaca cagccgccag aagatatcag ctgcattgca tggaacagac
601 aagttcagca tattttagca tcagccagtc ccagtggccg ggccactgta tgggatctta
661 ggaaaaatga gccaatcatc aaagtcagtg accatagtaa cagaatgcat tgttctgggt
721 tggcatggca tcctgatgtt gctactcaga tggtccttgc ctccgaggat gaccggttac
781 cagtgatcca gatgtgggat cttcgatttg cttcctctcc acttcgtgtc ctggaaaacc
841 atgccagggg gattttggca attgcttgga gcatggcaga tcctgaattg ttactgagct
901 gtggaaaaga tgctaagatt ctctgctcca atccaaacac aggagaggtg ttatatgaac
961 ttcccaccaa cacacagtgg tgcttcgata ttcagtggtg tccccgaaat cctgctgtct
1021 tatcagctgc ttcgtttgat gggcgtatca gtgtttattc tatcatggga ggaagcacag
1081 atggtttaag acagaaacaa gttgacaagc tttcatcatc ttttgggaat cttgatccct
1141 ttggcacagg acagcccctt cctccgttac aaattccaca gcagactgct cagcatagta
1201 tagtgctgcc tctgaagaag ccgcccaagt ggattcgaag gcctgttggt gcttcttttt
1261 catttggagg caaactggtt acgtttgaga atgtcagaat gccttctcat cagggagctg
1321 agcagcagca gcagcagcac catgtgttca ttagtcaggt tgtaacagaa aaggagttcc
1381 tcagccgatc agaccaactt cagcaggctg tgcagtcaca aggatttatc aattattgcc
1441 aaaaaaaaat tgatgcttct cagactgaat ttgagaaaaa tgtgtggtcc tttttgaagg
1501 taaactttga ggatgattct cgtggaaaat accttgaact tctaggatac agaaaagaag
1561 atctaggaaa gaagattgct ttggccttga acaaagtgga tggagccaat gtggctctta
1621 aagactctga ccaagtagca cagagtgatg gggaggagag ccctgctgct gaagagcagc
1681 tcttgggaga gcacattaaa gaggaaaaag aagaatctga atttctaccc tcatctggag
1741 gaacatttaa tatctctgtc agtggggaca ttgatggttt aattactcag gctttgctga
1801 cgggcaattt tgagagtgct gttgaccttt gtttacatga taaccgcatg gccgatgcca
1861 ttatattggc catagcaggt ggacaagaac tcttggctcg aacccagaaa aaatacttcg
1921 caaaatccca aagcaaaatt accaggctca tcactgcagt ggtgatgaag aactggaaag
1981 agattgttga gtcttgtgat cttaaaaatt ggagagaggc tttagctgca gtattgactt
2041 atgcaaagcc ggatgaattt tcagcccttt gtgatctttt gggaaccagg cttgaaaatg
2101 aaggagatag cctcctgcag actcaagcat gtctctgcta tatttgtgca gggaatgtag
2161 agaaattagt tgcatgttgg actaaagctc aagatggaag ccaccctttg tcacttcagg
2221 atctgattga gaaagttgtc atcctgcgaa aagctgtgca actcactcaa gccatggaca
2281 ctagtactgt aggagttctc ttggctgcga agatgagtca gtatgccaat ttgttggcag
2341 ctcagggcag tattgctgca gccttggctt ttcttcctga caacaccaac cagccaaata
2401 tcatgcagct tcgtgacaga ctttgtagag cacaaggaga gcctgtagca ggacatgaat
2461 cacctaaaat tccgtacgag aaacagcagc tccccaaggg caggcctgga ccagttgctg
2521 gccaccacca gatgccaaga gttcaaactc aacaatatta tccccatgga gaaaatcctc
2581 cacctccggg tttcataatg catggaaatg ttaatccaaa tgctgctggt cagcttccca
2641 catctccagg tcatatgcac acccaggtac caccttatcc acagccacag ccttatcaac
2701 cagcccagcc gtatcccttc ggaacagggg ggtcagcaat gtatcgacct cagcagcctg
2761 ttgctcctcc tacttcaaac gcttacccta acacccctta catatcttct gcttcttcct
2821 atactgggca gtctcagctg tacgcagcac agcaccaggc ctcttcacct acctccagcc
2881 ctgctacttc tttccctcct cccccttcct ctggagcatc cttccagcat ggcggaccag
2941 gagctccacc atcatcttca gcttatgcac tgcctcctgg aacaacaggt cctcagaatg
3001 gttggaatga ccctccagct ttgaacagag tacccaaaaa gaagaagatg cctgaaaact
3061 tcatgcctcc tgttcccatc acatcaccaa tcatgaaccc gttgggtgac ccccagtcac
3121 aaatgctgca gcaacagcct tcagctccag taccactgtc aagccagtct tcattcccac
3181 agccacatct tccaggtggc cagcccttcc atggcgtaca gcaacctctt ggtcaaacag
3241 gcatgccacc atctttttca aagcccaata ttgaaggtgc cccaggggct cctattggaa
3301 ataccttcca gcatgtgcag tctttgccaa caaaaaaaat taccaagaaa cctattccag
3361 atgagcacct cattctaaag accacatttg aggatcttat tcagcgctgc ctttcttcag
3421 caacagaccc tcaaaccaag aggaagctag atgatgccag caaacgtttg gagtttctgt
3481 atgataaact tagggaacag acactttcac caacaatcac cagtggttta cacaacattg
3541 caaggagcat tgaaactcga aactactcag aaggattgac catgcatacc cacatagtta
3601 gcaccagcaa cttcagtgag acctctgctt tcatgccagt tctcaaagtt gttctcaccc
3661 aggccaataa gctgggtgtc taaaaggaca gcttctcttc cactcaatat tgc
//