LOCUS BC117189 1552 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member 25,
mRNA (cDNA clone MGC:150798 IMAGE:40125740), complete cds.
ACCESSION BC117189
VERSION BC117189.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1552)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1552)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: D Column: 5.
FEATURES Location/Qualifiers
source 1..1552
/db_xref="H-InvDB:HIT000387479"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150798 IMAGE:40125740"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AATCGATT"
gene 1..1552
/gene="TNFRSF25"
/gene_synonym="APO-3"
/gene_synonym="DDR3"
/gene_synonym="DR3"
/gene_synonym="LARD"
/gene_synonym="TR3"
/gene_synonym="TRAMP"
/gene_synonym="WSL-1"
/gene_synonym="WSL-LR"
/db_xref="GeneID:8718"
/db_xref="HGNC:HGNC:11910"
/db_xref="MIM:603366"
CDS 69..1322
/gene="TNFRSF25"
/gene_synonym="APO-3"
/gene_synonym="DDR3"
/gene_synonym="DR3"
/gene_synonym="LARD"
/gene_synonym="TR3"
/gene_synonym="TRAMP"
/gene_synonym="WSL-1"
/gene_synonym="WSL-LR"
/codon_start=1
/product="tumor necrosis factor receptor superfamily,
member 25"
/protein_id="AAI17190.1"
/db_xref="GeneID:8718"
/db_xref="HGNC:HGNC:11910"
/db_xref="MIM:603366"
/translation="MEQRPRGCAAVAAALLLVLLGARAQGGTRSPRCDCAGDFHKKIG
LFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQV
ALENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDT
DCGTCLPGFYEHGDGCVSCPTSTLGSCPERCAAVCGWRQMFWVQVLLAGLVVPLLLGA
TLTYTYRHCWPHKPLVTADEAGMEALTPPPATHLSPLDSAHTLLAPPDSSEKICTVQL
VGNSWTPGYPETQEALCPQVTWSWDQLPSRALGPAAAPTLSPESPAGSPAMMLQPGPQ
LYDVMDAVPARRWKEFVRTLGLREAEIEAVEVEIGRFRDQQYEMLKRWRQQQPAGLGA
VYAALERMGLDGCVEDLRSRLQRGP"
BASE COUNT 263 a 516 c 497 g 276 t
ORIGIN
1 ctgaaggcgg aaccacgacg ggcagagagc acggagccgg gaagcccctg ggcgcccgtc
61 ggagggctat ggagcagcgg ccgcggggct gcgcggcggt ggcggcggcg ctcctcctgg
121 tgctgctggg ggcccgggcc cagggcggca ctcgtagccc caggtgtgac tgtgccggtg
181 acttccacaa gaagattggt ctgttttgtt gcagaggctg cccagcgggg cactacctga
241 aggccccttg cacggagccc tgcggcaact ccacctgcct tgtgtgtccc caagacacct
301 tcttggcctg ggagaaccac cataattctg aatgtgcccg ctgccaggcc tgtgatgagc
361 aggcctccca ggtggcgctg gagaactgtt cagcagtggc cgacacccgc tgtggctgta
421 agccaggctg gtttgtggag tgccaggtca gccaatgtgt cagcagttca cccttctact
481 gccaaccatg cctagactgc ggggccctgc accgccacac acggctactc tgttcccgca
541 gagatactga ctgtgggacc tgcctgcctg gcttctatga acatggcgat ggctgcgtgt
601 cctgccccac gagcaccctg gggagctgtc cagagcgctg tgccgctgtc tgtggctgga
661 ggcagatgtt ctgggtccag gtgctcctgg ctggccttgt ggtccccctc ctgcttgggg
721 ccaccctgac ctacacatac cgccactgct ggcctcacaa gcccctggtt actgcagatg
781 aagctgggat ggaggctctg accccaccac cggccaccca tctgtcaccc ttggacagcg
841 cccacaccct tctagcacct cctgacagca gtgagaagat ctgcaccgtc cagttggtgg
901 gtaacagctg gacccctggc taccccgaga cccaggaggc gctctgcccg caggtgacat
961 ggtcctggga ccagttgccc agcagagctc ttggccccgc tgctgcgccc acactctcgc
1021 cagagtcccc agccggctcg ccagccatga tgctgcagcc gggcccgcag ctctacgacg
1081 tgatggacgc ggtcccagcg cggcgctgga aggagttcgt gcgcacgctg gggctgcgcg
1141 aggcagagat cgaagccgtg gaggtggaga tcggccgctt ccgagaccag cagtacgaga
1201 tgctcaagcg ctggcgccag cagcagcccg cgggcctcgg agccgtttac gcggccctgg
1261 agcgcatggg gctggacggc tgcgtggaag acttgcgcag ccgcctgcag cgcggcccgt
1321 gacacggcgc ccacttgcca cctaggcgct ctggtggccc ttgcagaagc cctaagtacg
1381 gttacttatg cgtgtagaca ttttatgtca cttattaagc cgctggcacg gccctgcgta
1441 gcagcaccag ccggccccac ccctgctcgc ccctatcgct ccagccaagg cgaagaagca
1501 cgaacgaatg tcgagagggg gtgaagacat ttctcaactt ctcggccgga gt
//