LOCUS       BC117164                6936 bp    mRNA    linear   HUM 26-JUN-2006
DEFINITION  Homo sapiens SET domain containing 2, mRNA (cDNA clone MGC:150773
            IMAGE:40125715), complete cds.
ACCESSION   BC117164
VERSION     BC117164.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6936)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 6936)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAY-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 6 Row: C Column: 4.
FEATURES             Location/Qualifiers
     source          1..6936
                     /db_xref="H-InvDB:HIT000387454"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:150773 IMAGE:40125715"
                     /tissue_type="Cerebellum, Lung, PCR rescued clones"
                     /clone_lib="NIH_MGC_348"
                     /lab_host="DH10B"
                     /note="Vector: pCR-XL-TOPO with reversed insert; Clone
                     identification sequence tag: AAATCTTT"
     gene            1..6936
                     /gene="SETD2"
                     /gene_synonym="FLJ22472"
                     /gene_synonym="FLJ23184"
                     /gene_synonym="HIF-1"
                     /gene_synonym="HSPC069"
                     /gene_synonym="HYPB"
                     /gene_synonym="KIAA1732"
                     /db_xref="GeneID:29072"
                     /db_xref="HGNC:HGNC:18420"
     CDS             186..6371
                     /gene="SETD2"
                     /gene_synonym="FLJ22472"
                     /gene_synonym="FLJ23184"
                     /gene_synonym="HIF-1"
                     /gene_synonym="HSPC069"
                     /gene_synonym="HYPB"
                     /gene_synonym="KIAA1732"
                     /codon_start=1
                     /product="SET domain containing 2"
                     /protein_id="AAI17165.1"
                     /db_xref="GeneID:29072"
                     /db_xref="HGNC:HGNC:18420"
                     /translation="MERRGKYSSKLERESKRTSENEAIKRCCSPPNELGFRRGSSYSK
                     HDSSASRYKSTLSKPIPKSDKFKNSFCCTELNEEIKQSHSFSLQTPCSKGSELRMINK
                     NPEREKAGSPAPSNRLNDSPTLKKLDELPIFKSEFITHDSHDSIKELDSLSKVKNDQL
                     RSFCPIELNINGSPGAESDLATFCTSKTDAVLMTSDDSVTGSELSPLVKACMLSSNGF
                     QNISRCKEKDLDDTCMLHKKSESPFRETEPLVSPHQDKLMSMPVMTVDYSKTVVKEPV
                     DTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSVMKISSNSFMNVHLESKPVICD
                     SRNLTDHSKFACEEYKQSIGSTSSASVNHFDDLYQPIGSSGIASSLQSLPPGIKVDSL
                     TLLKCGENTSPVLDAVLKSKKSSEFLKHAGKETIVEVGSDLPDSGKGFASRENRRNNG
                     LSGKCLQEAQEEGNSILPERRGRPEISLDERGEGGHVHTSDDSEVVFSSCDLNLTMED
                     SDGVTYALKCDSSGHAPEIVSTVHEDYSGSSESSNDESDSEDTDSDDSSIPRNRLQSV
                     VVVPKNSTLPMEETSPCSSRSSQSYRHYSDHWEDERLESRRHLYEEKFESIASKACPQ
                     TDKFFLHKGTEKNPEISFTQSSRKQIDNRLPELSHPQSDGVDSTSHTDVKSDPLGHPN
                     SEETVKAKIPSRQQEELPIYSSDFEDVPNKSWQQTTFQNRPDSRLGKTELSFSSSCEI
                     PHVDGLHSSEELRNLGWDFSQEKPSTTYQQPDSSYGACGGHKYQQNAEQYGGTRDYWQ
                     GNGYWDPRSGRPPGTGVVYDRTQGQVPDSLTDDREEEENWDQQDGSHFSDQSDKFLLS
                     LQKDKGSVQAPEISSNSIKDTLAVNEKKDFSKNLEKNDIKDRGPLKKRRQEIESDSES
                     DGELQDRKKVRVEVEQGETSVPPGSALVGPSCVMDDFRDPQRWKECAKQGKMPCYFDL
                     IEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSRC
                     PNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKA
                     RVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVG
                     FFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRAAGGKMKKE
                     RSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRIETLEQKLTCLELIQNTHSQS
                     CLKSFLERHGLSLLWIWMAELGDGRESNQKLQEEIIKTLEHLPIPTKNMLEESKVLPI
                     IQRWSQTKTAVPPLSEGDGYSSENTSRAHTPLNTPDPSTKLSTEADTDTPKKLMFRRL
                     KIISENSMDSAISDATSELEGKDGKEDLDQLENVPVEEEEELQSQQLLPQQLPECKVD
                     SETNIEASKLPTSEPEADAEIELKESNGTKLEEPINEETPSQDEEEGVSDVESERSQE
                     QPDKTVDISDLATKLLDSWKDLKEVYRIPKKSQTEKENTTTERGRDAVGFRDQTPAPK
                     TPNRSRERDPDKQTQNKEKRKRRSSLSPPSSAYERGTKRPDDRYDTPTSKKKVRIKDR
                     NKLSTEERRKLFEQEVAQREAQKQQQQMQNLGMTSPLPYDSLGYNAPHHPFAGYPPGY
                     PMQAYVDPSNPNAGKVLLPTPSMDPVCSPAPYDHAQPLVGHSTEPLSAPPPVPVVPHV
                     AAPVEVSSSQYVAQSDGVVHQDSSVAVLPVPAPGPVQGQNYSVWDSNQQSVSVQQQYS
                     PAQSQATIYYQGQTCPTVYGVTSPYSQTTPPIVQSYAQPSLQYIQGQQIFTAHPQGVV
                     VQPAAAVTTIVAPGQPQPLQPSEMVVTNNLLDLPPPSPPKPKTIVLPPNWKTARDPEG
                     KIYYYHVITRQTQWDPPTWESPGDDASLEHEAEMDLGTPTYDENPMKASKKPKTAEAD
                     TSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVGRITTTEDFKHLARKLTHGVMNK
                     ELKYCKNPEDLECNENVKHKTKEYIKKYMQKFGAVYKPKEDTELE"
BASE COUNT         2249 a         1412 c         1575 g         1700 t
ORIGIN      
        1 agaggacgcg ctattctcgg ccatacacag ataacagagc acgagagagt tctgactcag
       61 aagaagagta taagaagaca tactcaaggc gtacctcatc tcattcctct tcttacagag
      121 acctaaggac atcatcctat tctaaatctg atcgggactg taaaactgag acctcttact
      181 tagagatgga aagaagaggc aagtattctt caaaactaga aagagaatct aaaaggactt
      241 cagaaaatga agcaattaaa agatgttgtt ctccccctaa tgaactggga ttccgacgag
      301 ggtcatcata ttctaagcat gacagtagtg cttcccgtta taaatctacc ctttcaaaac
      361 ctatacccaa gtctgataaa tttaaaaatt ctttctgttg tacagaatta aatgaagaaa
      421 tcaaacagtc tcattctttt agtttacaga caccttgttc aaaaggtagt gaattaagaa
      481 tgattaataa aaatcctgaa agagaaaagg ctgggtctcc agctccatca aatcgattaa
      541 atgattcacc tactttaaaa aagctagatg aattgcctat ttttaagtcc gaatttataa
      601 cacatgatag ccatgatagt attaaggaat tagactcttt atctaaagtg aagaatgatc
      661 aattaagaag tttttgtccc atagaattaa atataaatgg atctcctggg gcagaatctg
      721 atttggcaac attttgcact tctaaaactg atgctgtttt aatgacttct gatgatagtg
      781 tgactggatc ggaattatcc cctttggtca aagcatgcat gctttcatca aatggatttc
      841 agaatattag taggtgcaaa gaaaaagact tggatgatac ctgcatgctg cataagaagt
      901 cagaaagccc atttagagaa acagaacctc tggtgtcacc acaccaagat aaactcatgt
      961 ctatgccagt tatgactgtg gattattcca aaacagtagt taaagaacca gttgatacga
     1021 gggtttcttg ctgcaaaacc aaagattcag acatatactg tactttgaac gatagcaacc
     1081 cttctttgtg taactctgaa gctgaaaata ttgagccttc agttatgaag atttcttcaa
     1141 atagctttat gaatgtgcat ttggaatcaa aaccagttat atgtgatagt agaaatttga
     1201 cagatcactc aaaatttgca tgtgaagaat ataagcagag catcggtagc actagttcag
     1261 cttctgttaa tcattttgat gatttatatc aacctattgg gagttcaggt attgcttcat
     1321 ctcttcagag tcttccacca ggaataaagg tggacagtct aactctcttg aaatgcggag
     1381 agaacacatc tccagttctg gatgcagtgc taaagagtaa aaaaagttca gagtttttaa
     1441 agcatgcagg gaaagaaaca atagtagaag taggtagtga ccttcctgat tcaggaaagg
     1501 gatttgcttc cagggagaac aggcgtaata atgggttatc tgggaaatgt ttgcaagagg
     1561 ctcaagaaga agggaattcc atattgcctg aaagaagagg aagaccagaa atctctttag
     1621 atgaaagagg agaaggagga catgtgcata cttctgatga ctcagaagtt gtattttctt
     1681 cttgtgattt gaatttaacc atggaagaca gtgatggtgt aacttatgca ttaaagtgtg
     1741 acagtagtgg tcatgcccca gaaattgtgt ctacagttca tgaagattat tctggctctt
     1801 ctgaaagttc aaatgatgaa agtgattcag aagatacaga ttcggatgat agcagtattc
     1861 caagaaaccg tctccagtct gttgtggttg tgccaaagaa ttctactttg cccatggaag
     1921 aaacaagtcc ttgttcttct cggagcagtc aaagttatag acactattct gaccattggg
     1981 aagatgagag attggagtca aggagacatt tgtatgagga aaaatttgaa agtatagcaa
     2041 gtaaagcctg tcctcaaact gataagtttt tccttcataa aggaacagag aagaatccgg
     2101 aaatttcttt tacacagtcc agtagaaaac aaatagataa ccgcctgcct gaactttctc
     2161 atcctcagag tgatggggtt gatagtacaa gtcatacaga tgtgaaatct gaccctctgg
     2221 gtcacccaaa ttcagaggaa accgtgaaag ccaaaatacc ttctaggcag caagaagagc
     2281 tgccaattta ttcttctgat tttgaagatg tcccaaataa gtcttggcaa cagaccactt
     2341 tccaaaacag gccagatagt agactgggaa aaacagaatt gagtttttct tcctcttgtg
     2401 agataccaca tgtggatggc ttgcactcat cagaagagct cagaaactta ggttgggact
     2461 tctctcaaga aaagccttct accacgtatc agcaacctga cagtagctat ggagcttgtg
     2521 gtggacacaa gtatcagcaa aatgcagaac agtatggtgg gacacgtgat tactggcaag
     2581 gcaatggtta ctgggatcca agatcaggta gacctcctgg aactggggtt gtgtatgatc
     2641 gaactcaagg acaagtacca gattccctaa cagatgatcg tgaagaagag gagaattggg
     2701 atcaacagga tggatcccat ttttcagacc agtccgataa atttcttcta tcccttcaga
     2761 aagacaaggg gtcagtgcaa gcacctgaaa taagcagcaa ttccattaag gacactttag
     2821 ctgtgaatga aaagaaagat ttttcaaaaa acttagaaaa aaatgatatc aaagatagag
     2881 ggcctcttaa aaaaaggagg caggaaatag agagtgattc tgaaagtgat ggtgagcttc
     2941 aggacagaaa gaaagttaga gtggaggtag agcagggaga gacatcagtg cccccaggtt
     3001 cagcactggt tgggccctcc tgtgtcatgg atgacttcag ggacccacag cgatggaagg
     3061 aatgtgccaa gcaagggaaa atgccatgtt actttgatct tattgaagaa aatgtttatt
     3121 taacagaaag aaagaagaat aaatctcatc gagatattaa gcgaatgcag tgtgagtgta
     3181 cacctctttc taaagatgaa agagctcaag gtgaaatagc atgtggggaa gattgtctta
     3241 atcgtcttct catgattgaa tgttcttctc ggtgtccaaa tggggattat tgttccaata
     3301 gacggtttca gagaaaacag catgcagatg tggaagtcat actcacagaa aagaaaggct
     3361 ggggcttgag agctgccaaa gaccttcctt cgaacacctt tgtcctagaa tattgtggag
     3421 aggtactcga tcataaagag tttaaagctc gagtgaagga gtatgcacga aacaaaaaca
     3481 tccattacta tttcatggcc ctgaagaatg atgagataat agatgccact caaaaaggaa
     3541 attgctctcg tttcatgaat cacagctgtg aaccaaattg tgaaacccaa aaatggactg
     3601 tgaacggaca actgagggtt gggtttttta ccaccaaact ggttccttca ggctcagagt
     3661 taacgtttga ctatcagttc cagagatatg gaaaagaagc ccagaaatgt ttctgcggat
     3721 cagccaattg ccggggttac ctgggaggag aaaacagagt cagcatcaga gcagcaggag
     3781 ggaaaatgaa gaaggaacga tctcgtaaga aggattcagt ggatggagag ctagaagctc
     3841 tgatggaaaa tggtgagggt ctctctgata aaaaccaggt gctcagctta tcccggctaa
     3901 tggttagaat tgaaactttg gagcagaaac ttacctgtct ggaactcata cagaacacac
     3961 actcacagtc ctgcctgaag tcctttctgg aacgtcatgg gctgtctttg ttgtggatct
     4021 ggatggcaga gctaggtgac ggccgggaaa gtaaccagaa gcttcaggaa gagattataa
     4081 agactttgga acacttgccc attcctacta aaaatatgtt ggaggaaagc aaagtacttc
     4141 caattattca acgctggtct cagactaaga ctgctgtccc tccgttgagt gaaggagatg
     4201 ggtattctag tgagaataca tcgcgtgctc atacaccact caacacacct gatccttcca
     4261 ccaagctgag cacagaagct gacacagaca ctcccaagaa actaatgttt cgcagactga
     4321 aaattataag tgaaaatagc atggacagtg caatctctga tgcaaccagt gagctagaag
     4381 gcaaggatgg caaagaggat cttgatcaat tagaaaatgt ccctgtagag gaagaggaag
     4441 aattgcagtc acaacagcta ctcccacaac agctgcctga atgcaaagtt gatagtgaaa
     4501 ccaacataga agctagtaag ctacctacat ctgaaccaga agctgacgct gaaatagagc
     4561 tcaaagagag caacggcaca aaactagaag aacctattaa tgaagaaaca ccatcccaag
     4621 atgaagagga gggtgtgtct gatgtggaga gtgaaaggag ccaagaacag ccagataaaa
     4681 cagtggatat aagtgatttg gccaccaaac tcctggacag ttggaaagac ctaaaggagg
     4741 tatatcgaat tccaaagaaa agtcaaactg aaaaggaaaa cacaacaact gaacgaggaa
     4801 gggatgctgt tggcttcaga gatcaaacac ctgccccgaa gactcctaat aggtcaagag
     4861 agagagaccc agacaagcaa actcaaaata aagagaaaag gaaacgaaga agctccctct
     4921 caccaccctc ttctgcctat gagcggggaa caaaaaggcc agatgacaga tatgatacac
     4981 caacttctaa aaagaaagta cgaattaaag accgcaataa actttctaca gaggaacgcc
     5041 ggaagttgtt tgagcaagag gtggctcaac gggaggctca gaaacaacag caacagatgc
     5101 agaacctggg aatgacatca ccactgccct atgactctct tggttataat gccccgcatc
     5161 atccctttgc tggttaccca ccaggttatc ccatgcaggc ctatgtggat cccagcaacc
     5221 ctaatgctgg aaaggtgctc ctgcccacac ccagcatgga cccagtgtgt tctcctgctc
     5281 cttatgatca tgctcagccc ttggtgggac attctacaga acccctttct gcccctccac
     5341 cagtaccagt ggtgccacat gtggcagctc ctgtggaagt ttccagttcc cagtatgtgg
     5401 cccagagtga tggtgtagta caccaagact ccagcgttgc tgtcttgcca gtgccggccc
     5461 ccggcccagt tcagggacag aattatagtg tttgggattc aaaccaacag tctgtcagtg
     5521 tacagcagca gtactctcct gcacagtctc aagcaaccat atattatcaa ggacagacat
     5581 gtccaacagt ctatggtgtg acatcacctt attcacagac aactccacca attgtacaga
     5641 gttatgccca gccaagtctt cagtatatcc aggggcaaca gattttcaca gctcatccac
     5701 aaggagtggt ggtacagcca gccgcagcag tgactacaat agttgcacca gggcagcctc
     5761 agcccttgca gccatctgaa atggttgtga caaataatct cttggatctg ccgcccccct
     5821 ctcctcccaa accaaaaacc attgtcttac ctcccaactg gaagacagct cgagatccag
     5881 aagggaagat ttattactac catgtgatca caaggcagac tcagtgggat cctcctactt
     5941 gggaaagccc aggagatgat gccagccttg agcatgaagc tgagatggac ctgggaactc
     6001 caacatatga tgaaaacccc atgaaggcct cgaaaaagcc caagacagca gaagcagaca
     6061 cctccagtga actagcaaag aaaagcaaag aagtattcag aaaagagatg tcccagttca
     6121 tcgtccagtg cctgaaccct taccggaaac ctgactgcaa agtgggaaga attaccacaa
     6181 ctgaagactt taaacatctg gctcgcaagc tgactcacgg tgttatgaat aaggagctga
     6241 agtactgtaa gaatcctgag gacctggagt gcaatgagaa tgtgaaacac aaaaccaagg
     6301 agtacattaa gaagtacatg cagaagtttg gggctgttta caaacccaaa gaggacactg
     6361 aattagagtg actgttgggc cagggtggga ggatgggcgg tcaggtaaga cagactctag
     6421 ggagaggaaa tcctgtgggc ctttctgtcc cacccctgtc agcactgtgc tactgatgat
     6481 acatcaccct ggggaattca accctgcaga tgtcaactga aggccacaaa aatgaactcc
     6541 atctacaagt gattacctag ttgtgagctg ttggcatgtg gttagaagcc atcagaggtg
     6601 caagggctta gaaaagaccc tggccagacc tgactccact cttaaacctg ggtcttctcc
     6661 ttggcggtgc tgtcagcgca cagacccatg cgcatcccca cccacaaccc tttaccctga
     6721 tgatctgtat tatattttaa tgtatatgtg aatatattga aaataatttg ttttttcctg
     6781 gtttttgttt ggttttcgtt ttgcttttag cctctacatg ctaggatcac aggaagactt
     6841 tgtaaggaca gtttaagttc tcctgcaagg tttaatttgt tatcatgtaa atattccaaa
     6901 gcaggctgcc ttgtggtttt ggccagcctt gtgcta
//