LOCUS BC117159 1266 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens TATA box binding protein like 2, mRNA (cDNA clone
MGC:150768 IMAGE:40125710), complete cds.
ACCESSION BC117159
VERSION BC117159.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1266)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1266)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: B Column: 23.
FEATURES Location/Qualifiers
source 1..1266
/db_xref="H-InvDB:HIT000387449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150768 IMAGE:40125710"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GGAGAGTT"
gene 1..1266
/gene="TBPL2"
/gene_synonym="TBP2"
/gene_synonym="TRF3"
/db_xref="GeneID:387332"
/db_xref="HGNC:HGNC:19841"
/db_xref="MIM:608964"
CDS 72..1199
/gene="TBPL2"
/gene_synonym="TBP2"
/gene_synonym="TRF3"
/codon_start=1
/product="TATA box binding protein like 2"
/protein_id="AAI17160.1"
/db_xref="GeneID:387332"
/db_xref="HGNC:HGNC:19841"
/db_xref="MIM:608964"
/translation="MASAPWPERVPRLLAPRLPSYPPPPPTVGLPSMEQEETYLELYL
DQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFL
PDEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHP
GDTDSVQPSPEKPNSDSLSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLK
KIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYAR
VVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVK
PRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKKA"
BASE COUNT 341 a 331 c 280 g 314 t
ORIGIN
1 acgcttctct cgcgccctct gcaggaacct gggccgaggg ccgccccgcc tcgctgcccc
61 caggctcata aatggcctct gcgccctggc cggagcgggt tccgaggctg ctcgctccgc
121 gcttaccctc ttacccgccc ccacccccaa cagtgggatt accgtccatg gagcaggagg
181 agacctacct ggagctctac ctggaccagt gcgccgctca ggatggcctt gccccaccca
241 ggtctcccct gttcagccca gttgtacctt atgatatgta catactgaat gcatccaatc
301 cggatactgc atttaattcg aaccctgaag tcaaagaaac atctggtgat ttctcatctg
361 tggatcttag cttcctacca gatgaagtta cccaggaaaa taaagaccag cctgtcatta
421 gcaaacacga aactgaagaa aattctgaaa gccaaagtcc acaaagtagg ttgccatcac
481 ccagcgaaca ggacgttggg ctgggcttaa acagcagcag tttgtcaaat tcccattcac
541 agctgcaccc tggtgatact gactcagtcc agccctctcc tgagaaacca aactccgact
601 ccttgtctct ggcatccata actcccatga caccaatgac ccctatttca gaatgttgtg
661 gaattgtacc tcaactacag aatatagttt ccactgtaaa cctggcctgt aagttggatc
721 tgaagaaaat agctttgcat gcaaaaaatg cagaatataa cccaaagagg tttgctgctg
781 tcataatgag gatccgagag cccaggacaa cagcccttat atttagctct gggaagatgg
841 tctgcacggg agccaaaagt gaagagcagt ctcgacttgc agcaagaaaa tatgctcgtg
901 tggtgcagaa gcttgggttc cctgccagat tcctcgattt taaaattcag aacatggttg
961 gaagctgtga tgtgagattt cccatcaggc tggaaggttt ggtgctaacc catcagcagt
1021 tcagtagtta cgagcctgaa ctgtttcctg gtcttattta tagaatggta aaaccacgaa
1081 ttgtgttgct tatctttgta tctggaaaag ttgtgttgac aggtgccaaa gaacgttctg
1141 agatctatga agcatttgaa aacatctatc ctattctaaa aggttttaaa aaagcctgag
1201 catatcattc agcatctcac attattctgg tttgaatatg tccataagcc cagcacagaa
1261 acagct
//