LOCUS BC117123 1559 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens microtubule-associated protein 2, mRNA (cDNA clone
IMAGE:40125674), complete cds.
ACCESSION BC117123
VERSION BC117123.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1559)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1559)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: A Column: 11
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1559
/db_xref="H-InvDB:HIT000387413"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40125674"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCCCATCC"
gene 1..1559
/gene="MAP2"
/gene_synonym="MAP2A"
/gene_synonym="MAP2B"
/gene_synonym="MAP2C"
/db_xref="GeneID:4133"
/db_xref="HGNC:HGNC:6839"
/db_xref="MIM:157130"
CDS 78..1493
/gene="MAP2"
/gene_synonym="MAP2A"
/gene_synonym="MAP2B"
/gene_synonym="MAP2C"
/codon_start=1
/product="microtubule-associated protein 2"
/protein_id="AAI17124.1"
/db_xref="GeneID:4133"
/db_xref="HGNC:HGNC:6839"
/db_xref="MIM:157130"
/translation="MADERKDEAKAPHWTSAPLTEASAHSHPPEIKDQGGAGEGLVRS
ANGFPYREDEEGAFGEHGSQGTYSNTKENGINGELTSADRETAEEVSARIVQVVTAEA
VAVLKGEQEKEAQHKDQTAALPLAAEETANLPPSPPPSPASEQTVTVEEAAGGESALA
PSVFKQAKDKVSDGVTKSPEKRSSLPRPSSILPPRRGVSGDRDENSFSLNSSISSSAR
RTTRSEPIRRAGKSGTSTPTTPGSTAITPGTPPSYSSRTPGTPGTPSYPRTPHTPGTP
KSAILVPSEKKVAIIRTPPKSPATPKQLRLINQPLPDLKNVKSKIGSTDNIKYQPKGG
QVQIVTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFKEKAQAKVGSLDNAHH
VPGGGNVKIDSQKLNFREHAKARVDHGAEIITQSPGRSSVASPRRLSNVSSSGSINLL
ESPQLATLAEDVTAALAKQGL"
BASE COUNT 462 a 413 c 368 g 316 t
ORIGIN
1 tgagaacacg acacaacgaa ctttatattt taccacttcc ttgaatagtt gcaggagaaa
61 taacaaggca ttgaagaatg gcagatgaac ggaaagatga agcaaaggca cctcactgga
121 cctcagcacc gctaacagag gcatctgcac actcacatcc acctgagatt aaggatcaag
181 gcggagcagg ggaaggactt gtccgaagcg ccaatggatt cccatacagg gaggatgaag
241 agggtgcctt tggagagcat gggtcacagg gcacctattc aaataccaaa gagaatggga
301 tcaacggaga gctgacctca gctgacagag aaacagcaga ggaggtgtct gcaaggatag
361 ttcaagtagt cactgctgag gctgtagcag tcctgaaagg tgaacaagag aaagaagctc
421 aacataaaga ccagactgca gctctgcctt tagcagctga agaaacagct aatctgcctc
481 cttctccacc cccatcacct gcctcagaac agactgtcac agtggaggaa gcagcaggtg
541 gggaatcagc tctggctccc agtgtattta aacaggcaaa ggacaaagtc tctgacggag
601 taaccaagag cccagaaaag cgctcttctc tcccaagacc ttcctccatt ctccctcctc
661 ggcgaggtgt gtcaggagac agagatgaga attccttctc tctcaacagt tctatctctt
721 cttcagcacg gcggaccacc aggtcagagc caattcgcag agcagggaag agtggtacct
781 caacacccac tacccctggg tctactgcca tcactcctgg caccccacca agttattctt
841 cacgcacacc aggcactcct ggaaccccta gctatcccag gacccctcac acaccaggaa
901 cccccaagtc tgccatcttg gtgccgagtg agaagaaggt cgccatcata cgtactcctc
961 caaaatctcc tgcgactccc aagcagcttc ggcttattaa ccaaccactg ccagacctga
1021 agaatgtcaa atccaaaatc ggatcaacag acaacatcaa ataccagcct aaaggggggc
1081 aggtacaaat tgttaccaag aaaatagacc taagccatgt gacatccaaa tgtggctctc
1141 tgaagaacat ccgccacagg ccaggtggcg gacgtgtgaa aattgagagt gtaaaactag
1201 atttcaaaga aaaggcccaa gctaaagttg gttctcttga taatgctcat catgtacctg
1261 gaggtggtaa tgtcaagatt gacagccaaa agttgaactt cagagagcat gctaaagccc
1321 gtgtggacca tggggctgag atcattacac agtccccagg cagatccagc gtggcatcac
1381 cccgacgact cagcaatgtc tcctcgtctg gaagcatcaa cctgctcgaa tctcctcagc
1441 ttgccacttt ggctgaggat gtcactgctg cactcgctaa gcagggcttg tgaatatttc
1501 tcatttagca ttgaaataat aatatttagg catgagctct tggcaggagt gggctctga
//