LOCUS BC117122 1627 bp mRNA linear HUM 26-JUN-2006
DEFINITION Homo sapiens carnosine dipeptidase 1 (metallopeptidase M20 family),
mRNA (cDNA clone MGC:150731 IMAGE:40125673), complete cds.
ACCESSION BC117122
VERSION BC117122.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1627)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1627)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: A Column: 10.
FEATURES Location/Qualifiers
source 1..1627
/db_xref="H-InvDB:HIT000387412"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150731 IMAGE:40125673"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_286"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCCGCTCA"
gene 1..1627
/gene="CNDP1"
/gene_synonym="CN1"
/gene_synonym="CPGL2"
/gene_synonym="HsT2308"
/gene_synonym="MGC10825"
/db_xref="GeneID:84735"
/db_xref="HGNC:HGNC:20675"
CDS 40..1566
/gene="CNDP1"
/gene_synonym="CN1"
/gene_synonym="CPGL2"
/gene_synonym="HsT2308"
/gene_synonym="MGC10825"
/codon_start=1
/product="carnosine dipeptidase 1 (metallopeptidase M20
family)"
/protein_id="AAI17123.1"
/db_xref="GeneID:84735"
/db_xref="HGNC:HGNC:20675"
/translation="MDPKLGRMAASLLAVLLLLLLERGMFSSPSPPPALLEKVFQYID
LHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQ
LPDGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLY
GRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRF
FSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMAD
LVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDT
KEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVT
RHLEDVFSKRNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGS
TIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQLH
"
BASE COUNT 412 a 399 c 433 g 383 t
ORIGIN
1 ggttgggaaa gttgctagag gcttcagaac tccagcctaa tggatcccaa actcgggaga
61 atggctgcgt ccctgctggc tgtgctgctg ctgctgctgc tggagcgcgg catgttctcc
121 tcaccctccc cgcccccggc gctgttagag aaagtcttcc agtacattga cctccatcag
181 gatgaatttg tgcagacgct gaaggagtgg gtggccatcg agagcgactc tgtccagcct
241 gtgcctcgct tcagacaaga gctcttcaga atgatggccg tggctgcgga cacgctgcag
301 cgcctggggg cccgtgtggc ctcggtggac atgggtcctc agcagctgcc cgatggtcag
361 agtcttccaa tacctcccgt catcctggcc gaactgggga gcgatcccac gaaaggcacc
421 gtgtgcttct acggccactt ggacgtgcag cctgctgacc ggggcgatgg gtggctcacg
481 gacccctatg tgctgacgga ggtagacggg aaactttatg gacgaggagc gaccgacaac
541 aaaggccctg tcttggcttg gatcaatgct gtgagcgcct tcagagccct ggagcaagat
601 cttcctgtga atatcaaatt catcattgag gggatggaag aggctggctc tgttgccctg
661 gaggaacttg tggaaaaaga aaaggaccga ttcttctctg gtgtggacta cattgtaatt
721 tcagataacc tgtggatcag ccaaaggaag ccagcaatca cttacggaac ccgggggaac
781 agctacttca tggtggaggt gaaatgcaga gaccaggatt ttcactcagg aacctttggt
841 ggcatccttc atgaaccaat ggctgatctg gttgctcttc tcggtagcct ggtagactcg
901 tctggtcata tcctggtccc tggaatctat gatgaagtgg ttcctcttac agaagaggaa
961 ataaatacat acaaagccat ccatctagac ctagaagaat accggaatag cagccgggtt
1021 gagaaatttc tgttcgatac taaggaggag attctaatgc acctctggag gtacccatct
1081 ctttctattc atgggatcga gggcgcgttt gatgagcctg gaactaaaac agtcatacct
1141 ggccgagtta taggaaaatt ttcaatccgt ctagtccctc acatgaatgt gtctgcggtg
1201 gaaaaacagg tgacacgaca tcttgaagat gtgttctcca aaagaaatag ttccaacaag
1261 atggttgttt ccatgactct aggactacac ccgtggattg caaatattga tgacacccag
1321 tatctcgcag caaaaagagc gatcagaaca gtgtttggaa cagaaccaga tatgatccgg
1381 gatggatcca ccattccaat tgccaaaatg ttccaggaga tcgtccacaa gagcgtggtg
1441 ctaattccgc tgggagctgt tgatgatgga gaacattcgc agaatgagaa aatcaacagg
1501 tggaactaca tagagggaac caaattattt gctgcctttt tcttagagat ggcccagctc
1561 cattaatcac aagaaccttc tagtctgatc tgatccactg acagattcac ctcccccaca
1621 tccctag
//