LOCUS BC115736 5782 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens neuronal cell adhesion molecule, mRNA (cDNA clone
MGC:138846 IMAGE:40083062), complete cds.
ACCESSION BC115736
VERSION BC115736.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-APR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 19 Row: n Column: 1.
FEATURES Location/Qualifiers
source 1..5782
/db_xref="H-InvDB:HIT000387390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138846 IMAGE:40083062"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: AATGGGTG"
gene 1..5782
/gene="NRCAM"
/gene_synonym="KIAA0343"
/db_xref="GeneID:4897"
/db_xref="HGNC:HGNC:7994"
/db_xref="MIM:601581"
CDS 411..3989
/gene="NRCAM"
/gene_synonym="KIAA0343"
/codon_start=1
/product="NRCAM protein"
/protein_id="AAI15737.1"
/db_xref="GeneID:4897"
/db_xref="HGNC:HGNC:7994"
/db_xref="MIM:601581"
/translation="MQLKIMPKKKRLSAGRVPLILFLCQMISALEVPLDPKLLEDLVQ
PPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGTG
TLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSG
QSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYIC
YARFNHTQTIQQKQPISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAE
GLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTI
SVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRK
IDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIAN
RPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVA
RNKLGMAKNEVHLEIKDATWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKDN
RELPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPV
YDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVS
GTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSE
PDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPY
LIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIR
GHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNG
KGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQP
INSTHELGPLVDLKIPANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVTTVD
EAGILPPDVGAGKAMASRQVDIATQGWFIGLMCAVALLILILLIVCFIRRNKGGKYPV
KEKEDAHADPEIQPMKEDDGTFGEYSDAEDHKPLKKGSRTPSDRTVKKEDSDDSLVDY
GEGVNGQFNEDGSFIGQYSGKKEKEPAEGNESSEAPSPVNAMNSFV"
BASE COUNT 1798 a 1210 c 1223 g 1551 t
ORIGIN
1 cgtcgagaac ggaggacacc ggcggtccag ggtcctgggc agtcgcgcca gagctgagcg
61 gagggcgcgg cgcgagaacg aatctttgtg acattctctc tcagcattct ttatcccctg
121 tttgctgaag acttcgacca aagctggtct tagctgttgg cattctcctg agaaaaggat
181 agcttcagaa atcagaaaaa catttgggag gtgtctagcc cagtggacct tctgaagagc
241 aatgctaaga agacgtttgg tttaaagaat taaaaggaag aacaacttaa gagcttcttc
301 aaagttcccc gcatgaaaat tacttaaacg ttgcacacaa cgtttcacaa aatcttttgt
361 gaaagaagaa aaggaaattc agtgtgtgag tctcagcagg agttaagcta atgcagctta
421 aaataatgcc gaaaaagaag cgcttatctg cgggcagagt gcccctgatt ctcttcctgt
481 gccagatgat tagtgcactg gaagtacctc ttgatccaaa acttcttgaa gacttggtac
541 agcctccaac catcacccaa cagtctccaa aagattacat tattgaccct cgggagaata
601 ttgtaatcca gtgtgaagcc aaagggaaac cgcccccaag cttttcctgg acccgtaatg
661 ggactcattt tgacatcgat aaagaccctc tggtcaccat gaagcctggc acaggaacgc
721 tcataattaa catcatgagc gaagggaaag ctgagaccta tgaaggagtc tatcagtgta
781 cagcaaggaa cgaacgcgga gctgcagttt ctaataacat tgttgtccgc ccatccagat
841 caccattgtg gaccaaagaa aaacttgaac caatcacact tcaaagtggt cagtctttag
901 tacttccctg cagaccccca attggattac caccacctat aatattttgg atggataatt
961 cctttcaaag acttccacaa agtgagagag tttctcaagg tttgaatggg gacctttatt
1021 tttccaatgt cctcccagag gacacccgcg aagactatat ctgttatgct agatttaatc
1081 atactcaaac catacagcag aagcaaccta tttctgtgaa ggtgatttca gctaaatcaa
1141 gtagagagag gccaccaaca tttttaactc cagaaggcaa tgcaagtaac aaagaggaat
1201 taagaggaaa tgtgctttca ctggagtgca ttgcagaagg actgcctacc ccaattattt
1261 actgggcaaa ggaagatgga atgctaccca aaaacaggac agtttataag aactttgaga
1321 aaaccttgca gatcattcat gtttcagaag cagactctgg aaattaccaa tgtatagcaa
1381 aaaatgcatt aggagccatc caccatacca tttctgttag agttaaagcg gctccatact
1441 ggatcacagc ccctcaaaat cttgtgctgt ccccaggaga ggatgggacc ttgatctgca
1501 gagctaatgg caaccccaaa cccagaatta gctggttaac aaatggagtc ccaatagaaa
1561 ttgcccctga tgaccccagc agaaaaatag atggcgatac cattattttt tcaaatgttc
1621 aagaaagatc aagtgcagta tatcagtgca atgcctctaa tgaatatgga tatttactgg
1681 caaacgcatt tgtaaatgtg ctggctgagc caccacgaat cctcacacct gcaaacacac
1741 tctaccaggt cattgcaaac aggcctgctt tactagactg tgccttcttt gggtctcctc
1801 tcccaaccat cgagtggttt aaaggagcta aaggaagtgc tcttcatgaa gatatttatg
1861 ttttacatga aaatggaact ttggaaattc ctgtggccca aaaggacagt acaggaactt
1921 atacgtgtgt tgcaaggaat aaattaggga tggcaaagaa tgaagttcac ttagaaatca
1981 aagatgctac atggatcgtt aaacagcccg aatatgcagt tgtgcaaaga gggagcatgg
2041 tgtcctttga atgcaaagtg aaacatgatc acaccttatc cctcactgtc ctgtggctga
2101 aggacaacag ggaactgccc agtgatgaaa ggttcactgt tgacaaggat catctagtgg
2161 tagctgatgt cagtgacgat gacagcggga cctacacgtg tgtggccaac accactctgg
2221 acagcgtctc cgccagcgct gtgcttagcg ttgttgctcc tactccaact ccagctcccg
2281 tttacgatgt cccaaatcct ccctttgact tagaactgac agatcaactt gacaaaagtg
2341 ttcagctgtc atggacccca ggcgatgaca acaatagccc cattacaaaa ttcatcatcg
2401 aatatgaaga tgcaatgcac aagccagggc tgtggcacca ccaaactgaa gtttctggaa
2461 cacagaccac agcccagctg aagctgtctc cttacgtgaa ctactccttc cgcgtgatgg
2521 cagtgaacag cattgggaag agcttgccca gcgaggcctc tgagcagtat ttgacgaaag
2581 cctcagaacc agataaaaac cccacagctg tggaaggact gggatcagag cctgataatt
2641 tggtgattac gtggaagccc ttgaatggtt tcgaatctaa tgggccaggc cttcagtaca
2701 aagttagctg gcgccagaaa gatggtgatg atgaatggac atctgtggtt gtggcaaatg
2761 tatccaaata tattgtctca ggcacgccaa cctttgttcc atacctgatc aaagttcagg
2821 ccctgaatga catggggttt gcccccgagc cagctgtagt catgggacat tctggagaag
2881 acctcccaat ggtggctcct gggaacgtgc gtgtgaatgt ggtgaacagt accttagccg
2941 aggtgcactg ggacccagta cctctgaaaa gcatccgagg acacctacaa ggctatcgga
3001 tttactattg gaagacccag agttcatcta aaagaaacag acgtcacatt gagaaaaaga
3061 tcctcacctt ccaaggcagc aagactcatg gcatgttgcc ggggctagag ccctttagcc
3121 actacacact gaatgtccga gtggtcaatg ggaaagggga gggcccagcc agccctgaca
3181 gagtctttaa tactccagaa ggagtcccca gtgctccctc gtctttgaag attgtgaatc
3241 caacactgga ctctctcact ttggaatggg atccaccgag ccacccgaat ggcattttga
3301 cagagtacac cttaaagtat cagccaatta acagcacaca tgaattaggc cctctggtag
3361 atttgaaaat tcctgccaac aagacacggt ggactttaaa aaatttaaat ttcagcactc
3421 gatataagtt ttatttctat gcacaaacat cagcaggatc aggaagtcaa attacagagg
3481 aagcagtaac aactgtggat gaagctggta ttcttccacc tgatgtaggt gcaggcaaag
3541 cgatggcaag ccggcaggtg gatattgcaa ctcagggctg gttcattggt ctgatgtgtg
3601 ctgttgctct ccttatctta attttgctga ttgtttgctt catcagaaga aacaagggtg
3661 gtaaatatcc agttaaagaa aaggaagatg cccatgctga ccctgaaatc cagcctatga
3721 aggaagatga tgggacattt ggagaataca gtgatgcaga agaccacaag cctttgaaaa
3781 aaggaagtcg aactccttca gacaggactg tgaaaaaaga agatagtgac gacagcctag
3841 ttgactatgg agaaggggtt aatggccagt tcaatgagga tggctccttt attggacaat
3901 acagtggtaa gaaagagaaa gagccggctg aaggaaacga aagctcagag gcaccttctc
3961 ctgtcaacgc catgaattcc tttgtttaat ttttaagctc tttgccaata ttccatttct
4021 ctagaatgtt tatcctaagc acttgtttgt cagccctctc atactatgaa catatgggta
4081 gagagtatat tttctgctgt atgttagtat tatgagaata gttacagcaa aaacataact
4141 cagtcaaatg atatgttaat atgaactgga atgcaaagtg catacttttt cattcaaaat
4201 gggtattctt gatttcctca gaactgataa aaaataatgc aacatcacca acagatcctg
4261 ttatttcctc tgcaggatac agttcaatat gatgcatgaa aaatgctcca catttaaagg
4321 acatacccgt gtatgttatg aaaacatggt ttgatacttt gtttatacta ccctcagctg
4381 aacccctata tatgaattcc gttttcattg tcaagagtgt tactgtagta ttctctagaa
4441 cttcaatgtc tttgtggaca ttgttgtgaa attggtgact atgtatagct gtcgttagtc
4501 tttttgggag actgttagga acagtttgta cagtatatac ttgctaaatg agttcattat
4561 gacagtcaca ttgctgatgc ttactgagaa ctattaccta ctcttggctc ctgttactcc
4621 gtaggcttct taatcttcca ggcattacag cagcacagtg ttctactttt tacatcattt
4681 ctatgttcgg ttgtttttag gcataaacaa tgtgtattgc agtgcatttc ggcatttgtg
4741 ccatactgaa agaatcaaaa acaaatcatc caaattaaat ttcaaacatt atttcagaga
4801 acacagggca agacacatac agtgccttca gatattaagc attccacaac atcgtgcatt
4861 ctgtatcagc tggtccagtc cattctgggt cctagattac tgtcattgtc taaaagtaac
4921 ttttaaaaag cagagttcat gaaaactgca atgctgggaa aagaaggaaa catgaaaata
4981 aaaataagac agtttattag aaatagcatt tcctcataag cataaaaaga aaatctttgt
5041 tgccaactga agcacatgat gattttgtgg tcctttatgg tttctattac atgcagtaag
5101 aaagatgtca acatgctaga aaattaattt taaaactaag ttattccaac actaaaagca
5161 tacaacagca tgccaacagt aatatattat tctccaagac tttacctatg taagtgttca
5221 aaactctgca gcattaaaca acgtgtatgc aaattgttat ggatacattt cagaatctaa
5281 gaaatcaggc aagtgcttaa aaggccaacg gtccaaggga ttacatctgc agtttaaaaa
5341 gtaaatatat attctatcgt attcataaac aatatctatc aaatgggtta cctccaaata
5401 tgaaaatcta taacaaccta tggttgaagg aatgctcagt ttcatttgcc aataaattgg
5461 tttctcataa cttgcatcaa gtttaatttt aagtaaagct ttttatatgt agatattttg
5521 ttgaatttgt aaatacactt aaaatgtaga tgctatatgc ttataggtgt tacatacaaa
5581 taaacatgca atgtttatgt tgtactgtat aagaggtaag ctaattaatg cagtgaatgg
5641 gattggaaag catctactta aatatctatt gggttccccc ctccccccac cttttttgct
5701 gtgaaactga aatagtgaac ttttctacgt attgacagca gatttttcga tgaaatcttc
5761 agagctttgc ctatggggca ca
//