LOCUS BC115408 2082 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens protocadherin gamma subfamily A, 3, mRNA (cDNA clone IMAGE:40077418), partial cds. ACCESSION BC115408 VERSION BC115408.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2082) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2082) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-APR-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 18 Row: o Column: 19. FEATURES Location/Qualifiers source 1..2082 /db_xref="H-InvDB:HIT000387379" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40077418" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: NA" gene 1..>2082 /gene="PCDHGA3" /gene_synonym="PCDH-GAMMA-A3" /db_xref="GeneID:56112" /db_xref="HGNC:HGNC:8701" /db_xref="MIM:606290" CDS 1..>2082 /gene="PCDHGA3" /gene_synonym="PCDH-GAMMA-A3" /codon_start=1 /product="PCDHGA3 protein" /protein_id="AAI15409.1" /db_xref="GeneID:56112" /db_xref="HGNC:HGNC:8701" /db_xref="MIM:606290" /translation="MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSF VGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLC LVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDP DVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGG DPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQ VSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKIL VTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGNLPF KLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPP TFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSIN SNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPA LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSA KPNDSETQAIGH" BASE COUNT 525 a 577 c 531 g 449 t ORIGIN 1 atgaccaatt gcctgagttt ccgaaatggc agaggactgg ccctgctgtg cgcgctcctg 61 gggacgctgt gcgaaacagg atccggtcag atccgctact cggtgtctga ggagctagat 121 aaaggttcct tcgtgggcaa catcgctaac gacctggggc tagagccccg ggagctggcg 181 gagcgcggag tccgcatcgt ctccagaggt aggacgcagc ttttctctct gaatccgcaa 241 agcggcagct tggtcaccgc ggagaggata gaccgggagg agctctgcgc tcagatcccg 301 ctgtgtctgg taaaaattaa cattctggtt gaggataaat tgaaaatttt tgaagtagaa 361 atagaaatta aagatattaa tgataatgct cctaatttcc caacagagga attggaaata 421 aaaattggtg aactaacggt tcctggaacc cgatttccaa ttaaaactgc ttttgaccca 481 gatgtaggca ttaactccct gcagaactac aagcttagcc ccaatgacta cttctctctg 541 gctgtgaata gcgtctctga gggggccaag tatccagagc tggtgctgga gcgggccctg 601 gaccgtgaga aaaaagaaat tcaccagctt gtcctggttg cctctgatgg tggcgaccct 661 gtccactctg gcaacttgca catccaagtg atagtcctgg atgcaaatga caacccacca 721 atgtttactc agcctgagta ccgtgtgagt gtttgggaga acgtgcctgt gggtacccgg 781 ctgctcacgg tgaatgccac tgaccctgac gagggattca atgctcaagt gtcttatatt 841 ctagataaaa tgcctgggaa aatcgctgag attttccatc ttaactcagt gagtggagaa 901 gtatcaatat taaaaagtct agattatgag gatgccatgt tctatgaaat taaaattgaa 961 gcacaggatg gaccaggtct tctttcaaga gccaagattc tagtcacggt tctggatgtg 1021 aatgacaatg ctccagaaat tacaatcacg tctctcacaa gctcagtccc agaagagggc 1081 accgttggaa gagaaattgc tcttatcgac gtgcatgacc gagattctgg gcagaatggg 1141 caggttgaag tttttgtcct gggaaatctg ccatttaagt tagaaaaatc aatagatcaa 1201 tattaccgct tagtgacggc cacatccctg gaccgcgaac aaatatcaga atataacatt 1261 agtctgagag cctcagatgg gggaagcccg ccactgtcca cagaaactca catcaccctg 1321 catgtgattg acatcaatga caacccaccc accttccctc atttatccta ctccgcctac 1381 attccagaaa acaaccccag aggagcctcc atcttctcag tgacagccca ggacccagat 1441 agcaacaaca acgcccgcat cacttatgca ttgaccgagg acactctcca gggggcgccc 1501 ctgtcctcct tcgtctctat caactccaac actggcgtcc tatacgcgct gagatccttc 1561 gactacgagc aatttagaga cttaaagcta ctggtgacag ccagcgacag cgggaaccct 1621 ccactcagca gcaacgtgtc gctgaacctg ttcgtgctgg accagaacga caacgcgccc 1681 gagatcctgt accccgccct ccccacagac ggttccactg gcgtggagct ggcgcctcgc 1741 tccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacagaga ctcgggccag 1801 aacgcctggc tgtcctaccg cctgctcaag gccagcgagc cgggactctt ctcggtgggt 1861 ctgcacacgg gcgaggtgcg cacggcgcga gccctgctgg acagagacgc gctcaagcag 1921 agcctcgtgg tggccgtcca ggaccacggc cagccccctc tctccgccac tgtcacgctc 1981 accgtggccg tggccgacag gatccccgac atcctggccg acctgggcag cctcgagccc 2041 tccgccaaac ccaacgattc ggaaactcag gcaattggtc at //