LOCUS       BC115408                2082 bp    mRNA    linear   HUM 19-MAR-2007
DEFINITION  Homo sapiens protocadherin gamma subfamily A, 3, mRNA (cDNA clone
            IMAGE:40077418), partial cds.
ACCESSION   BC115408
VERSION     BC115408.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2082)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 18 Row: o Column: 19.
FEATURES             Location/Qualifiers
     source          1..2082
                     /db_xref="H-InvDB:HIT000387379"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40077418"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: NA"
     gene            1..>2082
                     /gene="PCDHGA3"
                     /gene_synonym="PCDH-GAMMA-A3"
                     /db_xref="GeneID:56112"
                     /db_xref="HGNC:HGNC:8701"
                     /db_xref="MIM:606290"
     CDS             1..>2082
                     /gene="PCDHGA3"
                     /gene_synonym="PCDH-GAMMA-A3"
                     /codon_start=1
                     /product="PCDHGA3 protein"
                     /protein_id="AAI15409.1"
                     /db_xref="GeneID:56112"
                     /db_xref="HGNC:HGNC:8701"
                     /db_xref="MIM:606290"
                     /translation="MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSF
                     VGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLC
                     LVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDP
                     DVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGG
                     DPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQ
                     VSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKIL
                     VTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGNLPF
                     KLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPP
                     TFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSIN
                     SNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPA
                     LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG
                     EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSA
                     KPNDSETQAIGH"
BASE COUNT          525 a          577 c          531 g          449 t
ORIGIN      
        1 atgaccaatt gcctgagttt ccgaaatggc agaggactgg ccctgctgtg cgcgctcctg
       61 gggacgctgt gcgaaacagg atccggtcag atccgctact cggtgtctga ggagctagat
      121 aaaggttcct tcgtgggcaa catcgctaac gacctggggc tagagccccg ggagctggcg
      181 gagcgcggag tccgcatcgt ctccagaggt aggacgcagc ttttctctct gaatccgcaa
      241 agcggcagct tggtcaccgc ggagaggata gaccgggagg agctctgcgc tcagatcccg
      301 ctgtgtctgg taaaaattaa cattctggtt gaggataaat tgaaaatttt tgaagtagaa
      361 atagaaatta aagatattaa tgataatgct cctaatttcc caacagagga attggaaata
      421 aaaattggtg aactaacggt tcctggaacc cgatttccaa ttaaaactgc ttttgaccca
      481 gatgtaggca ttaactccct gcagaactac aagcttagcc ccaatgacta cttctctctg
      541 gctgtgaata gcgtctctga gggggccaag tatccagagc tggtgctgga gcgggccctg
      601 gaccgtgaga aaaaagaaat tcaccagctt gtcctggttg cctctgatgg tggcgaccct
      661 gtccactctg gcaacttgca catccaagtg atagtcctgg atgcaaatga caacccacca
      721 atgtttactc agcctgagta ccgtgtgagt gtttgggaga acgtgcctgt gggtacccgg
      781 ctgctcacgg tgaatgccac tgaccctgac gagggattca atgctcaagt gtcttatatt
      841 ctagataaaa tgcctgggaa aatcgctgag attttccatc ttaactcagt gagtggagaa
      901 gtatcaatat taaaaagtct agattatgag gatgccatgt tctatgaaat taaaattgaa
      961 gcacaggatg gaccaggtct tctttcaaga gccaagattc tagtcacggt tctggatgtg
     1021 aatgacaatg ctccagaaat tacaatcacg tctctcacaa gctcagtccc agaagagggc
     1081 accgttggaa gagaaattgc tcttatcgac gtgcatgacc gagattctgg gcagaatggg
     1141 caggttgaag tttttgtcct gggaaatctg ccatttaagt tagaaaaatc aatagatcaa
     1201 tattaccgct tagtgacggc cacatccctg gaccgcgaac aaatatcaga atataacatt
     1261 agtctgagag cctcagatgg gggaagcccg ccactgtcca cagaaactca catcaccctg
     1321 catgtgattg acatcaatga caacccaccc accttccctc atttatccta ctccgcctac
     1381 attccagaaa acaaccccag aggagcctcc atcttctcag tgacagccca ggacccagat
     1441 agcaacaaca acgcccgcat cacttatgca ttgaccgagg acactctcca gggggcgccc
     1501 ctgtcctcct tcgtctctat caactccaac actggcgtcc tatacgcgct gagatccttc
     1561 gactacgagc aatttagaga cttaaagcta ctggtgacag ccagcgacag cgggaaccct
     1621 ccactcagca gcaacgtgtc gctgaacctg ttcgtgctgg accagaacga caacgcgccc
     1681 gagatcctgt accccgccct ccccacagac ggttccactg gcgtggagct ggcgcctcgc
     1741 tccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacagaga ctcgggccag
     1801 aacgcctggc tgtcctaccg cctgctcaag gccagcgagc cgggactctt ctcggtgggt
     1861 ctgcacacgg gcgaggtgcg cacggcgcga gccctgctgg acagagacgc gctcaagcag
     1921 agcctcgtgg tggccgtcca ggaccacggc cagccccctc tctccgccac tgtcacgctc
     1981 accgtggccg tggccgacag gatccccgac atcctggccg acctgggcag cctcgagccc
     2041 tccgccaaac ccaacgattc ggaaactcag gcaattggtc at
//