LOCUS BC115386 3075 bp mRNA linear HUM 01-NOV-2006
DEFINITION Homo sapiens heat shock transcription factor family member 5, mRNA
(cDNA clone IMAGE:40038135), partial cds.
ACCESSION BC115386
VERSION BC115386.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3075)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3075)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-APR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 18 Row: h Column: 10.
FEATURES Location/Qualifiers
source 1..3075
/db_xref="H-InvDB:HIT000387361"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40038135"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GACTCA sequenced from
the forward primer"
gene <1..3075
/gene="HSF5"
/gene_synonym="FLJ40311"
/db_xref="GeneID:124535"
/db_xref="HGNC:HGNC:26862"
CDS <1..1490
/gene="HSF5"
/gene_synonym="FLJ40311"
/codon_start=3
/product="HSF5 protein"
/protein_id="AAI15387.1"
/db_xref="GeneID:124535"
/db_xref="HGNC:HGNC:26862"
/translation="GGIENGVGELGSGGEAPARRGDGGAALHPHQPQQLPRQAVAPGE
QPALPLHPLGRPRRGAAYRSAALRGRAAQPAGPRPEPHGPVAVGQFHRSFRRDSLSPY
SCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRF
PTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHM
DALSSCVTPTASSYAHCNYFQNPSMQSSYPVEFLPSNWPCSTTDENTKTEVNLEAVFQ
IVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNPCSASQASQLEPLTPV
GSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAAIQQAHVKLKEHLN
HNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLISEMGPASKPSED
TGLATPARYREHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE"
BASE COUNT 870 a 667 c 647 g 891 t
ORIGIN
1 ggggagggat cgagaacggt gtgggagagc taggctcggg gggcgaggcc ccggcccggc
61 ggggcgatgg aggcgctgct ctccaccccc atcaacccca acaacttccc cgccaagctg
121 tggcgcctgg tgaacagccc gcgctaccgc tccatccgct gggacggccg cggcgagggg
181 ctgcttatcg atcagccgct cttcgaggcc gagctgctca gcccgcgggg ccccggcccg
241 agccgcacgg accagtggct gtaggacaat ttcaccggtc atttcgtcga gatagtttgt
301 ctccttactc ctgtgtatca actccatccc acgaccacag tacttaccct ctgaaaggtt
361 tagatcggac cccagttcct catagaatat ggcagaactc ccttggaatg catcctggac
421 aagtggagac atctcccaca ttttcagata aaggggttcc gtttcctgta ctccagaggt
481 ttccaactga ggttacctat acactgcagc ccagcaccac atctgtacat gttcaacaag
541 gtcctcaaac aatggtcagc tcctcccaaa aatacagtaa ctacacaccc tcagcacagt
601 actcgcaagc ctactatcca acagctgtgc tacagtgctg ttctcctacc cacatggatg
661 ctctaagtag ttgtgtcact cccactgcct cttcctatgc acactgcaac tacttccaga
721 atccttcaat gcagtcctcc tatccagttg aatttttgcc ttccaattgg ccctgcagta
781 ctactgatga aaatacaaag acagaagtaa acctagaggc tgtctttcag atagttgatg
841 agttgcattc ctcccctaaa ttggagatgg taaaggtgga gcctgttgag aatcagtgcc
901 caacatctcc gtcttacaga ggccaacaca ttttagctaa ttctaacaac agcaatccat
961 gttctgcaag tcaggctagc cagctggagc cacttactcc tgtaggctca gatattatgt
1021 cttttgtggt tggaacagaa caagcagttg cctgctctct accacagtca cctgagtaca
1081 tctataccat ccacacagct cagcctgttg aaaatagcac aatacaggaa tctgcagcca
1141 tccagcaagc tcatgtcaaa ctgaaggagc acctaaatca taatccatct ccatcttcag
1201 tagtatttgt gcaggaaggg ccaccattca gcacacacca ggtggatgcc aacataaaat
1261 gccagaccag ttcacgtgag aatatcttgc cgtcagaaca gatgggattc ctcatttcag
1321 aaatggggcc tgctagcaag cctagtgaag acacaggttt agccactcca gccagataca
1381 gagagcacag aagcaactca caacaaggaa agtcccctga tcttcatctg ctggtggacg
1441 tggcctgcaa gcaggagcgc tttccaaagg aggaagaatt aaaagagtga ggaatggatg
1501 acaaatgtga cattgtgcac tagctgtagc tggaggcaga ctagccttgc acatgacaaa
1561 ctgttgggat tttttcagtt ctgttaagga aaaaaaagta ttttttgttt cgttaattga
1621 gaattttgtt aattgagaat tgggaatttg tatgtactac agtggttcag ttcagattat
1681 ctgccttgac aaactactga acatctagca gccacgtttt ttggctgccc agatcccttt
1741 taaatgaaaa gttctgacct tctgttatag tcaaggagca tctaaaaact gctccatcta
1801 tggtactaag aataatctgt gtgtgtgctg atttgttgtc ttgccactca aactgtagtc
1861 agcacaactt tagtggggaa ttcagtctct ctgattcaag tcacagtgtg atccttttag
1921 aggagattgt gtgagaaaca aaggcatgtg aggtcaccag catcacaggt ctaaatgcat
1981 caggaattcc agggaagaaa ctctggagaa gagctaattt tctaagtgat taaccaggaa
2041 attctcttac ttcctaaccc agcattctgt tttaagagca aggcatccgg acttggacca
2101 tctatcacac ttaacagccc ctgattcttt tatattaatg gaagcattct tctattttca
2161 tatctttctt taattttaat gatacattat cataaatggt aaaaagattt tattaatata
2221 tcacttattt aaatgtcttt aaagaaagta tttaacttgt ttaatataat tgtatttata
2281 aatgctgata gatttaaagg ttttaaagtt ttatattttt attattgcag gatagaagga
2341 taaaggatgc atgtgtagta tttttatttt gaaaggaaaa tgtacaatgt gtgaacaaaa
2401 acattaagag atttaatata ctattttctt attttagatt tttacattca ataagtataa
2461 attctcatct atataaggta ttgtgtgcaa atttgggaaa aaactgatta gcagccattt
2521 agtagaagct atgcctctga tttttaaaga atggtttcaa tctggtttaa gcttctgaga
2581 gaattttgga taatgggata gatggtaaca tttttttctt atccctgtta caggattcta
2641 gatttgtgca gtaggattgt gggactgtgt tttaggagag aaggatgtct tggatgtcca
2701 gtttctgtgg ttaatccctt acttgcttat ccagtgacag caagaaactt tctgatttaa
2761 agtctttcaa ttgaccaaaa ctttcttatt ggattctgtt tcagttctcc tattaagcac
2821 tgcagaaacg aaaggaaagc ctaggaatat gaaactaatt aaaaaggcac ttggtgatat
2881 gacatagtac tatgctagcc gttgtggatg taacagttca tttcttatac tgcattgtgc
2941 cttcccaatg atgtcaaacc ctagaaatat tacagagatc tacttttctg gaaaagggtg
3001 agctctgtat tgatctgcag tgactctgtt tagatattaa agtaggttct gaaaagcgac
3061 ctgtgtggtc cctct
//