LOCUS BC115026 4193 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens claspin homolog (Xenopus laevis), mRNA (cDNA clone
MGC:131613 IMAGE:7961366), complete cds.
ACCESSION BC115026
VERSION BC115026.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4193)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4193)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-APR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Narayan Bhat
cDNA Library Preparation: Bhat Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 1 Row: b Column: 5.
FEATURES Location/Qualifiers
source 1..4193
/db_xref="H-InvDB:HIT000340793"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131613 IMAGE:7961366"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_330"
/lab_host="DH10B"
/note="Vector: TOPO Zeroblunt"
gene 1..4193
/gene="CLSPN"
/gene_synonym="CLASPIN"
/db_xref="GeneID:63967"
/db_xref="HGNC:HGNC:19715"
/db_xref="MIM:605434"
CDS 74..4093
/gene="CLSPN"
/gene_synonym="CLASPIN"
/codon_start=1
/product="claspin homolog (Xenopus laevis)"
/protein_id="AAI15027.1"
/db_xref="GeneID:63967"
/db_xref="HGNC:HGNC:19715"
/db_xref="MIM:605434"
/translation="MTGEVGSEVHLEINDPNVISQEEADSPSDSGQGSYETIGPLSEG
DSDEEIFVSKKLKNRKVLQDSDSETEDTNASPEKTTYDSAEEENKENLYAGKNTKIKR
IYKTVADSDESYMEKSLYQENLEAQVKPCLELSLQSGNSTDFTTDRKSSKKHIHDKEG
TAGKAKVKSKRRLEKEERKMEKIRQLKKKETKNQEDDVEQPFNDSGCLLVDKDLFETG
LEDENNSPLEDEESLESIRAAVKNKVKKHKKKEPSLESGVHSFEEGSELSKGTTRKER
KAARLSKEALKQLHSETQRLIRESALNLPYHMPENKTIHDFFKRKPRSTCHGNAMALL
KSSKYQSSHRKEIIDTANTTEMNSDHHSKGSEQTTGAENEVETNALPVVSKEAQIITG
SDESCRKDLVKNEELEIQEKQKQSDIRPSPGDSSVLQQESNFLGNNHSEECQVGGLVA
FEPHALEGEGPQNPEETDEKVEEPEQQNKSSAVGPPEKVRRFTLDRLKQLGVDVSIKP
RLGADEDSFVILEPETNRELEALKQRFWKHANPAAKPRAGQTVNVNVIVKDMGTDGKE
ELKADVVPVTLAPKKLDGASHTKPGEKLQVLKAKLQEAMKLRRFEERQKRQALFKLDN
EDGFEEEEQEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLL
SSEEIETKDEKEMDKENNDGSSEIGKAVGFLSVPKSLSSDSTLLLFKDSSSKMGYFPT
EEKSETDENSGKQPSKLDEDDSCSLLTKESSHNSSFELIGSTIPSYQPCNRQTGRGTS
FFPTAGGFRSPSPGLFRASLVSSASKSSGKLSEPSLPIEDSQDLYNASPEPKTLFLGA
GDFQFCLEDDTQSQLLDADGFLNVRNHRNQYQALKPRLPLASMDGNAMDTNMDELLDL
CTGKLTSQAEKHLPRKSDKKENMEELLNLCSGKFTSQDASTPASSELNKQEKESSMGD
PMEEALALCSGSFPTDKEEEDEEEEFGDFRLVSNDNEFDSDEDEHSDSGNDLALEDHE
DDDEEELLKRSEKLKRQMRLRKYLEDEAEVSGSDVGSEDEYDGEEIDEYEEDVIDEVL
PSDEELQSQIKKIHMKTMLDDDKRQLRLYQERYLADGDLHSDGPGRMRKFRWKNIDDA
SQMDLFHRDSDDDQTEEQLDESEARWRKERIEREQWLRDMAQQGKITAEEEEEIGEDS
QFMILAKKVTAKALQKNASRPMVIQESKSLLRNPFEAIRPGSAQQVKTGSLLNQPKAV
LQKLAALSDHNPSAPRNSRNFVFHTLSPVKAEAAKESSKSQVKKRGPSFMTSPSPKHL
KTDDSTSGLTRSIFKYLES"
BASE COUNT 1464 a 769 c 1064 g 896 t
ORIGIN
1 gaagttatca gtcgacggct gagggaatca gagacagctc cgtccctagt ggagcgcagg
61 ggaggcagaa gtcatgacag gcgaggtggg ttctgaggtt cacctagaaa tcaatgaccc
121 aaacgtcatt tcacaagagg aagcagatag tccttcagat agtggacagg gcagctatga
181 aacaattgga cccttgagtg aaggagattc agatgaagag atatttgtaa gtaagaagtt
241 gaaaaacagg aaggttctac aagacagtga ttccgaaaca gaggacacaa atgcctctcc
301 agagaaaact acctatgaca gtgccgagga ggaaaataaa gagaatttat atgctgggaa
361 aaatacaaaa atcaaaagga tttacaaaac tgtggcagac agtgatgaaa gttacatgga
421 aaagtctttg tatcaggaaa atcttgaagc gcaagtgaaa ccttgcttag agctgagtct
481 tcagtctgga aactctacag actttaccac tgacagaaag agttccaaaa agcacataca
541 tgataaagaa ggaactgcag gaaaagcaaa agtaaaatca aaaagaagac ttgagaaaga
601 ggagagaaaa atggaaaaaa ttagacagct aaaaaagaag gaaacaaaaa accaggaaga
661 tgatgtagaa cagccattta atgacagtgg ctgtcttctt gtggataaag acctttttga
721 aactgggttg gaggatgaaa ataactctcc attggaagat gaagagtcat tagaatcaat
781 aagagcagct gtaaaaaaca aagtaaaaaa gcacaagaaa aaagaaccat ctttggagag
841 tggggtccat tcatttgagg aaggaagtga gttatcaaaa ggaaccacga ggaaggaaag
901 aaaggcagcc agattaagta aagaagcatt aaaacaactg catagtgaga ctcagcgcct
961 tattcgagag tctgcactga accttccata tcatatgcct gagaataaaa ccattcatga
1021 tttcttcaaa cgtaaacccc ggtccacttg ccacggaaat gccatggcac tattgaagtc
1081 atctaaatat cagtcaagcc atcgcaaaga aatcatagac actgcaaata ctactgaaat
1141 gaacagtgat caccatagta aaggttctga gcagacaaca ggtgcagaaa atgaagtgga
1201 aactaatgca ctccctgtag tttcaaagga agcccagatc attactggat cagatgagtc
1261 ttgcaggaag gatttggtaa aaaatgaaga gctagaaatt caggagaaac agaagcagag
1321 tgacattaga ccttcacctg gggacagctc agtgttgcaa caggaatcca acttcctcgg
1381 gaacaatcac agtgaggaat gtcaggttgg agggcttgta gcatttgaac ctcatgccct
1441 ggagggtgaa ggcccccaaa atccagaaga aacagatgag aaagtggaag agcctgagca
1501 gcaaaataaa tcatcagcag ttgggccacc tgaaaaagtg agacggttta ctctggatag
1561 acttaagcaa ctgggagtag atgtttccat taaaccacgg ctaggtgctg atgaagattc
1621 ctttgtgata cttgaacctg aaaccaacag agaactggaa gccttgaagc agcgtttctg
1681 gaagcatgct aatccagcag ccaaacccag ggctggtcag acagtgaatg tgaacgtcat
1741 agtgaaagac atgggcactg atggaaagga agagctaaaa gcagatgtgg tacctgtgac
1801 tttagcacct aagaagttgg atggagcaag ccacacaaaa ccaggtgaaa agcttcaggt
1861 gttaaaagct aaactgcaag aagcaatgaa actccgaagg tttgaggagc gccagaagcg
1921 ccaagcactg tttaaattag ataatgaaga tgggtttgag gaagaggagc aggaagagga
1981 agaaatgaca gatgagtctg aggaagatgg agaagagaag gtagagaaag aagagaaaga
2041 ggaagaacta gaggaagagg aggagaaaga agaggaggag gaagaagaag gaaatcagga
2101 gactgcagaa ttccttctta gtagtgaaga aatagaaaca aaagatgaaa aagaaatgga
2161 taaagaaaat aatgatggca gtagtgaaat tggcaaggca gttggcttcc tctctgttcc
2221 caagtctctc tcatcagatt ctactttact tctgtttaag gacagctctt ccaagatggg
2281 ttactttcct actgaagaaa aatcagaaac agatgaaaac tcaggcaagc agcctagcaa
2341 actggatgag gatgattcat gttcattgct aacaaaggag agcagccaca atagcagctt
2401 tgagctgatt ggctccacga ttccatccta tcagccttgc aacagacaaa caggccgtgg
2461 gaccagtttt ttccctacag caggaggatt cagatctcct tcccctgggc tatttcgagc
2521 cagtttggtc agctcagctt ctaagagttc agggaaactg tctgagcctt cacttcccat
2581 agaggattcc caggatctgt ataacgcctc cccagagcct aagacacttt tcctaggagc
2641 aggagacttc cagttctgtt tagaagatga cactcagagc caactgttgg atgcagatgg
2701 gttcttaaat gttagaaacc acaggaatca gtaccaagct ttgaagcctc gattgccatt
2761 ggccagtatg gatgggaatg ccatggatac caacatggat gagctgttgg atttgtgtac
2821 tggaaagctc acatctcagg ctgaaaaaca tctacccagg aagagtgaca agaaagagaa
2881 catggaggaa cttctgaacc tttgttcagg aaaattcact tctcaggatg cctccactcc
2941 agcctcatca gagttaaata aacaggagaa ggagagcagc atgggtgatc caatggaaga
3001 agcacttgct ctttgctcag gctcttttcc cacagacaag gaagaggaag acgaggagga
3061 ggaatttgga gactttcggc ttgtttcaaa tgataatgag tttgatagtg atgaggatga
3121 acacagtgac tctggtaatg atctggcact ggaagaccat gaagatgatg atgaagaaga
3181 actcctgaag cgatctgaga agttgaaaag gcaaatgagg ttgaggaaat acctggagga
3241 tgaggcagag gtgtcaggaa gtgatgtggg aagcgaagat gagtatgatg gggaagaaat
3301 tgatgaatat gaagaggacg taattgatga agtacttcct tctgatgagg aactgcagag
3361 tcaaatcaag aaaatacaca tgaaaactat gttggatgat gataagcgac agctacgttt
3421 ataccaagag aggtaccttg ctgatgggga tctgcacagc gatggtcctg ggcgaatgag
3481 gaagtttcga tggaaaaaca tagatgatgc ttcccagatg gacttgttcc acagagactc
3541 tgatgatgat cagactgaag aacagcttga tgagtcagaa gccaggtgga ggaaggagcg
3601 aattgaacga gagcagtggc ttcgggacat ggcacagcag gggaaaatta cagctgaaga
3661 agaagaagaa attggggagg acagtcagtt tatgatactg gccaagaaag ttacagccaa
3721 agcactgcag aagaatgcca gtcgccctat ggttattcag gaatcaaagt ctttgctcag
3781 aaatcctttt gaagccatca gaccaggaag tgctcaacag gtgaagacag gctcactgct
3841 aaaccagccc aaagctgtgc ttcagaaact ggctgctctc tctgaccata accccagtgc
3901 tcctcgaaat tcaagaaact ttgtctttca tacactttct cctgtcaagg ctgaggcggc
3961 aaaggaatcg tctaagtctc aggtaaagaa aaggggtcca tctttcatga cttctccttc
4021 acctaagcac ctcaaaacag atgatagcac ttcaggattg acgcgaagca tcttcaaata
4081 tttggagagc taacaccatc aaaggtgcca aaatctacat tgagactgct ttgagaagtt
4141 tctagcactg aaagttggaa ttgacactcc agccaatgat ccttaagctt tct
//