LOCUS BC115025 4007 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens claspin homolog (Xenopus laevis), mRNA (cDNA clone
MGC:131612 IMAGE:7961363), complete cds.
ACCESSION BC115025
VERSION BC115025.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4007)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4007)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-APR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Narayan Bhat
cDNA Library Preparation: Bhat Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 1 Row: b Column: 12.
FEATURES Location/Qualifiers
source 1..4007
/db_xref="H-InvDB:HIT000340792"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131612 IMAGE:7961363"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_330"
/lab_host="DH10B"
/note="Vector: TOPO Zeroblunt"
gene 1..4007
/gene="CLSPN"
/gene_synonym="CLASPIN"
/db_xref="GeneID:63967"
/db_xref="HGNC:HGNC:19715"
/db_xref="MIM:605434"
CDS 74..3901
/gene="CLSPN"
/gene_synonym="CLASPIN"
/codon_start=1
/product="CLSPN protein"
/protein_id="AAI15026.1"
/db_xref="GeneID:63967"
/db_xref="HGNC:HGNC:19715"
/db_xref="MIM:605434"
/translation="MTGEVGSEVHLEINDPNVISQEEADSPSDSGQGGYETIGPLSEG
DSDEEIFVSKKLKNRKVLQDSDSETEDTNASPEKTTYDSAEEENKENLYAGKNTKIKR
IYKTVADSDESYMEKSLYQENLEAQVKPCLELSLQSGNSTDFTTDRKSSKKHIHDKEG
TAGKAKVKSKRRLEKEERKMEKIRQLKKKETKNQEDDVEQPFNDSGCLLVDKDLFETG
LEDENNSPLEDEESLESIRAAVKNKVKKHKKKEPSLESGVHSFEEGSELSKGTTRKER
KAARLSKEALKQLHSETQRLIRESALNLPYHMPENKTIHDFFKRKPRPTCHGNAMALL
KSSKYQSSHHKEIIDTANTTEMNSDHHSKGSEQTTGAENEVETNALPVVSKETQIITG
SDESCRKDLVKNEELEIQEKQKQSDIRPSPGDSSVLQQESNFLGNNHSEECQVEGLVA
FEPHALEGEGPQNPEETDEKVEEPEQQNKSSAVGPPEKVRRFTLDRLKQLGVDVSIKP
RLGADEDSFVILEPETNRGEKLQVLKAKLQEAMKLRRFEERQKRQALFKLDNEDGFEE
EEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIE
TKDEKEMDKENNDGSSEIGKAVGFLSVPKSLSSDSTLLLFKDSSSKMGYFPTEEKSET
DENSGKQPSKLDEDDSCSLLTKESSHNSSFELIGSTIPSYQPCNRQTGRGTSFFPTAG
GFRSPSPGLFRASLVSSASKSSGKLSEPSLPIEDSQDLYNASPEPKTLFLGAGDFQFC
LEDDTQSQLLDADGFLNVRNHRNQYQALKPRLPLASMDENAMDANMDELLDLCTGKFT
SQAEKHLPRKGDEKENMEELLNLCSGKFTSQDASTPASSELNKQEKESSMGDPMEEAL
ALCSGSFPTDKEEEDEEEEFGDFRLVSNDNEFDSDEDEHSDSGNDLALEDHEDDDEEE
LLKRSEKLKRQMRLRKYLEDEAEVSGSDVGSEDEYDGEEIDEYEEDVIDEVLPSDEEL
QSQIKKIHMKTMLDDDKRQLRLYQERYLADGDLHSDGPGRMRKFRWKNIDDASQMDLF
HRDSDDDQTEEQLDESEARWRKERIEREQWLRDMAQQGKITAEEEEEIGEDSQFMILA
KKVTAKALQKNASRPMVIQESKSLLRNPFEAIRPGSAQQVKTGSLLNQPKAVLQKLAA
LSDHNPSAPRNSRNFVFHTLSPVKAEAAKESSKSQVKKRGPSFMTSPSPKHLKTDDST
SGLTRSIFKYLES"
BASE COUNT 1402 a 730 c 1012 g 863 t
ORIGIN
1 gaagttatca gtcgacggct gagggaatca gagacagctc cgtccctagt ggagcgcagg
61 ggaggcagaa gtcatgacag gcgaggtggg ttctgaggtt cacctagaaa tcaatgaccc
121 aaacgtcatt tcacaagagg aagcagatag tccttcagat agtggacagg gcggctatga
181 aacaattgga cccttgagtg aaggagattc agatgaagag atatttgtaa gtaagaagtt
241 gaaaaacagg aaggttctac aagacagtga ttccgaaaca gaggacacaa atgcctctcc
301 agagaaaact acctatgaca gtgccgagga ggaaaataaa gagaatttat atgctgggaa
361 aaatacaaaa atcaaaagga tttacaaaac tgtggcagac agtgatgaaa gttacatgga
421 aaagtctttg tatcaggaaa atcttgaagc gcaagtgaaa ccttgcttag agctgagtct
481 tcagtctgga aactctacag actttaccac tgacagaaag agttccaaaa agcacataca
541 tgataaagaa ggaactgcag gaaaagcaaa agtaaaatca aaaagaagac ttgagaaaga
601 ggagagaaaa atggaaaaaa ttagacagct aaaaaagaag gaaacaaaaa accaggaaga
661 tgatgtagaa cagccattta atgacagtgg ctgtcttctt gtggataaag acctttttga
721 aactgggttg gaggatgaaa ataactctcc attggaagat gaagagtcat tagaatcaat
781 aagagcagct gtaaaaaaca aagtaaaaaa gcacaagaaa aaagaaccat ctttggagag
841 tggggtccat tcatttgagg aaggaagtga gttatcaaaa ggaaccacga ggaaggaaag
901 aaaggcagcc agattaagta aagaagcatt aaaacaactg catagtgaga ctcagcgcct
961 tattcgagag tctgcactga accttccata tcatatgcct gagaataaaa ccattcatga
1021 tttcttcaaa cgtaaacccc ggcccacttg ccacggaaat gccatggcac tattgaagtc
1081 atctaaatat cagtcaagcc atcacaaaga aatcatagac actgcaaata ctactgaaat
1141 gaacagtgat caccatagta aaggttctga gcagacaaca ggtgcagaaa atgaagtgga
1201 aactaatgca ctccctgtag tttcaaagga aacccagatc attactggat cagatgagtc
1261 ttgcaggaag gatttggtaa aaaatgaaga gctagaaatt caggagaaac agaagcagag
1321 tgacattaga ccttcacctg gggacagctc agtgttgcaa caggaatcca acttcctcgg
1381 gaacaatcac agtgaggaat gtcaggttga agggcttgta gcatttgaac ctcatgccct
1441 ggagggtgaa ggcccccaaa atccagaaga aacagatgag aaagtggaag agcctgagca
1501 gcaaaataaa tcatcagcag ttgggccacc tgaaaaagtg agacggttta ctctggatag
1561 acttaagcaa ctgggagtag atgtttccat taaaccacgg ctaggtgctg atgaagattc
1621 ctttgtgata cttgaacctg aaaccaacag aggtgaaaag cttcaggtgt taaaagctaa
1681 actgcaagaa gcaatgaaac tccgaaggtt tgaggagcgc cagaagcgcc aagcactgtt
1741 taaattagat aatgaagatg ggtttgagga agaggaggag gaagaggaag aaatgacaga
1801 tgagtctgag gaagatggag aagagaaggt agagaaagaa gagaaagagg aagaactaga
1861 ggaagaggag gagaaagaag aggaggagga agaagaagga aatcaggaga ctgcagaatt
1921 ccttcttagt agtgaagaaa tagaaacaaa agatgaaaaa gaaatggata aagaaaataa
1981 tgatggcagt agtgaaattg gcaaggcagt tggcttcctc tctgttccca agtctctctc
2041 atcagattct actttacttc tgtttaagga cagctcttcc aagatgggtt actttcctac
2101 tgaagaaaaa tcagaaacag atgaaaactc aggcaagcag cctagcaaac tggatgagga
2161 tgattcatgt tcattgctaa caaaggagag cagccacaat agcagctttg agctgattgg
2221 ctccacgatt ccatcctatc agccttgcaa cagacaaaca ggccgtggga ccagtttttt
2281 ccctacagca ggaggattca gatctccttc ccctgggcta tttcgagcca gtttggtcag
2341 ctcagcttct aagagttcag ggaaactgtc tgagccttca cttcccatag aggattccca
2401 ggatctgtat aacgcctccc cagagcctaa gacacttttc ctaggagcag gagacttcca
2461 gttctgttta gaagatgaca ctcagagcca actgttggat gcagatgggt tcttaaatgt
2521 tagaaaccac aggaatcagt accaagcttt gaagcctcga ttgccattgg ccagtatgga
2581 tgagaatgcc atggatgcca acatggatga gctgttggat ttgtgtactg gaaagttcac
2641 atctcaggct gaaaaacatc tacccaggaa gggtgacgag aaagagaaca tggaggaact
2701 tctgaacctt tgttcaggaa aattcacttc tcaggatgcc tccactccag cctcatcaga
2761 gttaaataaa caggagaagg agagcagcat gggtgatcca atggaagaag cacttgctct
2821 ttgctcaggc tcttttccca cagacaagga agaggaagac gaggaggagg aatttggaga
2881 ctttcggctt gtttcaaatg ataatgagtt tgatagtgat gaggatgaac acagtgactc
2941 tggtaatgat ctggcactgg aagaccatga agatgatgat gaagaagaac tcctgaagcg
3001 atctgagaag ttgaaaaggc aaatgaggtt gaggaaatac ctggaggatg aggcagaggt
3061 gtcaggaagt gatgtgggaa gcgaagatga gtatgatggg gaagaaattg atgaatatga
3121 agaggacgta attgatgaag tacttccttc tgatgaggaa ctgcagagtc aaatcaagaa
3181 aatacacatg aaaactatgt tggatgatga taagcgacag ctacgtttat accaagagag
3241 gtaccttgct gatggggatc tacacagcga tggtcctggg cgaatgagga agtttcgatg
3301 gaaaaacata gatgatgctt cccagatgga cttgttccac agagactctg atgatgatca
3361 gactgaagaa cagcttgatg agtcagaagc caggtggagg aaggagcgaa ttgaacgaga
3421 gcagtggctt cgggacatgg cacagcaggg gaaaattaca gctgaagaag aagaagaaat
3481 tggggaggac agtcagttta tgatactggc caagaaagtt acagccaaag cactgcagaa
3541 gaatgccagt cgccctatgg ttattcagga atcaaagtct ttgctcagaa atccttttga
3601 agccatcaga ccaggaagtg ctcaacaggt gaagacaggc tcactgctaa accagcccaa
3661 agctgtgctt cagaaactgg ctgctctctc tgaccataac cccagtgctc ctcgaaattc
3721 gagaaacttt gtctttcata cactttctcc tgtcaaggct gaggcggcaa aggaatcgtc
3781 taagtctcag gtaaagaaaa ggggtccatc tttcatgact tctccttcac ctaagcacct
3841 caaaacagat gatagcactt caggattgac gcgaagcatc ttcaaatatt tggagagcta
3901 acaccatcaa aggtgccaaa atctacattg agactgcttt gagaagtttc tagcactgaa
3961 agttggaatt gacactccag ccaatgatcc ttaagctttc tagacat
//