LOCUS BC115002 1770 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens abhydrolase domain containing 9, mRNA (cDNA clone
MGC:131519 IMAGE:7482856), complete cds.
ACCESSION BC115002
VERSION BC115002.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1770)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1770)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-APR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Allen Robins, Bresagen
cDNA Library Preparation: Express Genomics
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 1 Row: c Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376163.
FEATURES Location/Qualifiers
source 1..1770
/db_xref="H-InvDB:HIT000340781"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131519 IMAGE:7482856"
/tissue_type="Embryonic stem cells, isolated from the
Inner Cell Mass of Blastocyst stage embryos, BG01,
Markers:- SSEA1-, SSEA3+, SSEA4+, Tra 1-60+, Tra 1-81+,
CD9+, Alk Phos+, Oct4+, Nanog+, Passage number:- 21"
/clone_lib="NIH_MGC_260"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1770
/gene="ABHD9"
/gene_synonym="FLJ22408"
/db_xref="GeneID:79852"
/db_xref="HGNC:HGNC:23760"
CDS 84..1166
/gene="ABHD9"
/gene_synonym="FLJ22408"
/codon_start=1
/product="ABHD9 protein"
/protein_id="AAI15003.1"
/db_xref="GeneID:79852"
/db_xref="HGNC:HGNC:23760"
/translation="MPELVVTALLAPSRLSLKLLRAFMWSLVFSVALVAAAVYGCIAL
THVLCRPRRGCCGRRRSASPACLSDPSLGEHGFLNLKSSGLRLHYVSAGRGNGPLMLF
LHGFPENWFSWRYQLREFQSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVIL
GLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAPMSVYQDYSLHHISQFFRS
HYMFLFQLPWLPEKLLSMSDFQILKTTLTHRKTGIPCLTPSELEAFLYNFSQPGGLTG
PLNYYRNLFRNFPLEPQELTTPTLLLWGEKDTYLELGLVEAIGSRFVPGRLEAHILPG
IGHWIPQSNPQEMHQYMWAFLQDLLD"
BASE COUNT 399 a 542 c 449 g 380 t
ORIGIN
1 cgcccactta actgaagatc caggatcccc tccttaaggt gcccctggcc ggcagcgccg
61 ccgtggtccc ggagcgcggc gacatgccgg agctggtggt gaccgcgctg ctggcgccgt
121 cgcgcctgtc gctgaagctg ctgcgcgcct tcatgtggag cctggtgttc tcggtggcgc
181 tggtggccgc ggcggtctac ggctgcatag cgctcacgca cgtgctgtgc cggccccggc
241 gcggctgctg cgggcgccgt cggagcgcgt cccccgcctg cctgagcgac ccctcgctgg
301 gtgagcacgg tttcctgaac ctcaagagct cgggcctgcg tctgcactat gtctcggctg
361 gacgaggtaa cggacccctc atgctgtttc tgcacggctt ccctgagaac tggttctcct
421 ggcgttacca gctccgggag ttccagagcc gcttccatgt tgtggctgtg gacttgcgag
481 gctatggccc ctcggatgca cctcgggatg tggactgcta cacaatcgac ctgctgctgg
541 tggacatcaa agatgtcatc ctaggcctgg gttactcgaa gtgcatcctt gtggcccatg
601 actggggtgc cctccttgcc tggcatttct ccatctacta cccatccctg gtcgagcgga
661 tggttgtggt cagtggtgcc cccatgtcgg tgtaccaaga ctattccctg caccacatca
721 gccagttctt ccgttcccac tacatgttcc tgttccagct gccctggctg cccgagaagc
781 tgctgtctat gtctgacttt cagattctga agaccaccct cacccaccgc aagacaggca
841 tcccatgctt gacccccagc gagctcgagg ccttccttta taacttctca cagcctggtg
901 gcctcactgg gcccctcaac tactaccgaa acctcttcag gaacttcccc ctggaacccc
961 aggagctgac cacacccaca ttgctgctgt ggggggagaa ggacacttac ttggagctgg
1021 ggctggtgga agccatcggc agccgctttg tgccgggccg cttggaggcc cacatcctgc
1081 caggcatagg gcattggatc ccacagagca acccccagga gatgcaccag tacatgtggg
1141 ccttcttgca agacctgctg gactagtggt ccttgctggc ctgcccagga ggcatggata
1201 ctcaggaagg aacacacacc cattatctgt gtgtgcctgg gagtccatac aatgtccata
1261 catgggtgaa ctcttgaatc gctcataggc atgggactcc tggatcccac acaagcgcac
1321 ctatgggtgc ctcgggacac accaacccct atactcacac acaggcatgg atgcatgtgt
1381 gtgtaacaaa cactttgacc ctgggaactg ggtatacctc tcttccagtg gagccagatg
1441 ccgagaccga gtgtcccacc tcctcccttc ctggggcctc actctgcgct ttgccaaagt
1501 cgcttctctg ccatagctgc acagacctta aaccctgacc ttcctgtccc tgccttcgac
1561 ctcctgcctg ggtcttcagc tcagtgctac tctgaataca atactgctga ccacatttgg
1621 ctacttcaac ttaaatgtat gttaattgaa atgaaataca atgaaaatgc agtgctcaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//