LOCUS BC114960 3706 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens zinc finger protein, Y-linked, mRNA (cDNA clone
MGC:138710 IMAGE:40054055), complete cds.
ACCESSION BC114960
VERSION BC114960.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3706)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3706)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-APR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 19 Row: j Column: 22.
FEATURES Location/Qualifiers
source 1..3706
/db_xref="H-InvDB:HIT000340779"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138710 IMAGE:40054055"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TGAATT"
gene 1..3706
/gene="ZFY"
/db_xref="GeneID:7544"
/db_xref="HGNC:HGNC:12870"
/db_xref="MIM:490000"
CDS 148..2553
/gene="ZFY"
/codon_start=1
/product="zinc finger protein, Y-linked"
/protein_id="AAI14961.1"
/db_xref="GeneID:7544"
/db_xref="HGNC:HGNC:12870"
/db_xref="MIM:490000"
/translation="MDEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEIQEAVFVSN
IVDSDITVHNFVPDDPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIPEQVLDS
DVTEEVSLPHCTVPDDVLASDITSTSMSMPEHVLTSESMHVCDIGHVEHMVHDSVVEA
EIITDPLTSDIVSEEVLVADCAPEAVIDASGISVDQQDNDKASCEDYLMISLDDAGKI
EHDGSTGVTIDAESEMDPCKVDSTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDH
GVELLDQNSSIRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAA
AAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQ
KPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKK
KYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKE
KGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIH
TGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQ
ESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKG
KKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGR
KVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEV
GLP"
BASE COUNT 1181 a 650 c 795 g 1080 t
ORIGIN
1 gggcagggtg ggaaaagttc gcccgtttgt ccggaaggca gttgatggac ctggggtcga
61 caccactgcg gacgcagggc acggcacggg ggcgagaagg cgaaggctgc aggcgtgagg
121 agctgtgact aatgagaatt aaaggccatg gatgaagatg aatttgaatt gcagccacaa
181 gagccaaact cattttttga tggaatagga gctgatgcta cacacatgga tggtgatcag
241 attgttgtgg aaatacaaga agcagttttt gtttctaata ttgtggattc tgacataact
301 gtgcataact ttgttcctga tgacccagac tcagttgtaa tccaagatgt tgttgaagat
361 gttgtcatag aggaggatgt tcagtgctca gatatcttag aagaggcaga tgtatctgaa
421 aatgtcatca ttcctgagca agtgctggac tcagatgtaa ctgaagaagt ttctttacca
481 cactgcacag tcccagatga tgttttagct tctgacatta cttcaacctc aatgtctatg
541 ccagaacatg ttttaacgag tgaatccatg catgtgtgtg acattggaca tgttgaacat
601 atggtgcatg atagtgtagt ggaagcagaa atcattactg atcctctgac gagtgacata
661 gtttcagaag aagtattggt agcagactgt gcccctgaag cagtcataga tgccagcggg
721 atctcagtgg accagcaaga taatgacaaa gccagctgtg aggactacct aatgatttcg
781 ttggatgatg ctggcaaaat agaacatgat ggttccactg gagtgaccat cgatgcagaa
841 tcagaaatgg atccttgtaa agtggatagc acttgtcctg aagtcatcaa ggtgtacatt
901 tttaaagctg accctggaga agatgactta ggtggaactg tagacattgt ggagagtgaa
961 cctgaaaatg atcatggagt tgaactactt gatcagaaca gcagtattcg tgttcccagg
1021 gaaaagatgg tttatatgac tgtcaatgac tctcaacaag aagatgaaga tttaaatgtt
1081 gctgaaattg ctgatgaagt ttatatggaa gtgatcgtag gagaggagga tgctgctgtt
1141 gcagcagcag cagctgctgt gcatgagcag caaattgatg aggatgaaat gaaaaccttc
1201 gtaccaattg catgggcagc agcttatggt aataattctg atggaattga aaaccggaat
1261 ggcactgcaa gtgccctctt gcacatagat gagtctgctg gccttggcag actggctaaa
1321 cagaaaccaa agaaaaagag aagacctgat tccaggcagt accaaacagc aataattatt
1381 ggccctgatg gtcatccttt gactgtctat ccttgcatga tttgtgggaa gaagtttaag
1441 tcgaggggtt ttttgaaaag acacatgaaa aaccatcctg aacaccttgc caagaagaag
1501 taccactgta ctgactgtga ttacactacc aataagaaga taagtttaca taaccacctg
1561 gagagccaca agctgaccag caaggcagag aaggccattg aatgtgatga gtgtgggaag
1621 catttttctc atgcaggggc tttgtttact cacaaaatgg tgcataagga aaaaggggcc
1681 aacaaaatgc acaagtgtaa attctgtgaa tatgagacag ctgaacaggg gttattgaat
1741 cgccacctct tggcagtcca cagcaagaac tttcctcata tttgtgtgga gtgtggtaaa
1801 ggtttccgac acccgtcgga actgagaaag cacatgcgaa tccataccgg cgagaagcca
1861 taccaatgcc agtactgtga atataggtct gcagactctt ctaacttgaa aacacatata
1921 aaaacaaagc atagtaaaga gatgccattc aagtgtgaca tttgtcttct gactttctca
1981 gataccaaag aagtgcagca acatactctt gtccaccaag aaagcaaaac acatcagtgt
2041 ttgcattgcg accacaagag ttcaaactca agtgatttga aacgacatgt aatttcagtt
2101 catacgaaag actatcctca taagtgtgag atgtgcgaga aaggctttca caggccttca
2161 gaacttaaga aacatgtggc tgtccacaaa ggtaaaaaaa tgcaccaatg tagacattgt
2221 gactttaaga ttgcagaccc atttgttcta agtcgccata ttctctcagt tcacacaaag
2281 gatcttccat ttaggtgtaa gagatgtaga aagggattta ggcaacaaaa tgagcttaaa
2341 aagcatatga agacacacag tggcaggaaa gtatatcagt gtgagtactg tgagtatagc
2401 actacagatg cctcaggctt taaacggcac gttatttcca ttcatacaaa agactatcct
2461 catcggtgtg agtactgcaa gaaaggcttc cgaagacctt cagaaaagaa ccagcacata
2521 atgagacacc ataaagaagt tggtctgccc taacagtgtg tctacaagct tgtaaagatg
2581 ttggccttga agcagaaaat tcatttttta aagccagtct tgttcacatc cattactata
2641 cattgaatta tgctgtgtaa aaatagaatt attgcttcta gtccactttt ctttacattt
2701 tattcaatac gctgtcctga atcctattca gtttctttaa tagatgagga aaaatagcaa
2761 caagcaagtt gcttataata aaataatttg tgattctata ctgaattttc agtcataaaa
2821 gctttactat ttatttacat atttattcat gttcatggta ctcttctaag acaaaatcag
2881 attgataact atgaaagtaa catttttgac ccatttcctc ctacacaagt gtttcacatt
2941 ggagacatct gctaatataa atgggaggtt ttactgtcaa gtccaattag caaaacgtgg
3001 taataatttt tttgtcagta ttttcagatt acatgataaa attttacatt tgagcttcta
3061 gcattgatta atataggata ttgaccacgt ttatgtttaa atttcatttt gttcagcaga
3121 caaaatgtac ttcccttaac tttcattaat agtgtttaca tcttttgtca gcacagcaaa
3181 cttttagaaa gtaatagttt tacttatttt tatcttctgt tttctctttg tactgctttg
3241 tcttgcattg tgttccaaca catgagactt actgctcact gaattttgga gtcttttaga
3301 ggtaaattgt ggactcagga ttttttgaaa cttggtgtgt aactctaaat cttgtatatg
3361 catctttgtt gcttattaca tatttacaca cacaaccaca aattttaaac ttatgatgaa
3421 aatttacaat aacctgaaag atccagagat gtatgagagc attttgtaac ttgttattca
3481 gttactaaat ttgaggtgaa taattaaaaa gaaaaggaca ttaggagagt gaaaatcttc
3541 tcttcaaata atctttgata gataaaaatg gaaggtaaga tgtttctaga tagaatgttt
3601 tcatacaatt tcagcttcat atcataaatt tttctggaaa gctatttcag acatagattt
3661 catagtattt ttctgagaat cctgtgaagg aacgctgtct ctttgc
//