LOCUS BC114546 3205 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens ataxin 2, mRNA (cDNA clone MGC:133091 IMAGE:40027340),
complete cds.
ACCESSION BC114546
VERSION BC114546.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3205)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 17 Row: d Column: 8.
FEATURES Location/Qualifiers
source 1..3205
/db_xref="H-InvDB:HIT000340730"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:133091 IMAGE:40027340"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: ATTGTGCA"
gene 1..3205
/gene="ATXN2"
/gene_synonym="ATX2"
/db_xref="GeneID:6311"
/db_xref="HGNC:HGNC:10555"
/db_xref="MIM:601517"
CDS 127..3147
/gene="ATXN2"
/gene_synonym="ATX2"
/codon_start=1
/product="ATXN2 protein"
/protein_id="AAI14547.1"
/db_xref="GeneID:6311"
/db_xref="HGNC:HGNC:10555"
/db_xref="MIM:601517"
/translation="MRMVHILTSVVCDLVLDAAHEKSTESSSGPKREEIMESILFKCS
DFVVVQFKDMDSSYAKRDAFTDSAISAKVNGEHKEKDLEPWDAGELTANEELEALEND
VSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIE
SSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWG
SGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRM
SPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVP
RLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRA
VTPSSEAKDSRLQDQRQNSPAGNKENIKPNETSPSFSKAENKGISPVVSEHRKQIDDL
KKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKDSFIENSSSNCTSG
SSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKST
LNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYP
VPVSPGVQPLYPIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSAMMHPASAAGPPIAA
TPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGL
VSSSATQYGAHEQTHAMYVSTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGG
SHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPAA
QQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQA
ALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL"
BASE COUNT 902 a 929 c 670 g 704 t
ORIGIN
1 cccgagaaag caacccagcg cgccgcccgc tcctcacgtg tccctcccgg ccccggggcc
61 acctcacgtt ctgcttccgt ctgacccctc cgacttccga tttcttttga tggaatctat
121 gcaaatatga ggatggttca tatacttaca tcagttgttt gtgatttggt acttgatgcc
181 gcacatgaga aaagtacaga atccagttcg gggccgaaac gtgaagaaat aatggagagt
241 attttgttca aatgttcaga ctttgttgtg gtacagttta aagatatgga ctccagttat
301 gcaaaaagag atgcttttac tgactctgct atcagtgcta aagtgaatgg cgaacacaaa
361 gagaaggacc tggagccctg ggatgcaggt gaactcacag ccaatgagga acttgaggct
421 ttggaaaatg acgtatctaa tggatgggat cccaatgata tgtttcgata taatgaagaa
481 aattatggtg tagtgtctac gtatgatagc agtttatctt cgtatacagt gcccttagaa
541 agagataact cagaagaatt tttaaaacgg gaagcaaggg caaaccagtt agcagaagaa
601 attgagtcaa gtgcccagta caaagctcga gtggccctgg aaaatgatga taggagtgag
661 gaagaaaaat acacagcagt tcagagaaat tccagtgaac gtgaggggca cagcataaac
721 actagggaaa ataaatatat tcctcctgga caaagaaata gagaagtcat atcctgggga
781 agtgggagac agaattcacc gcgtatgggc cagcctggat cgggctccat gccatcaaga
841 tccacttctc acacttcaga tttcaacccg aattctggtt cagaccaaag agtagttaat
901 ggaggtgttc cctggccatc gccttgccca tctccttcct ctcgcccacc ttctcgctac
961 cagtcaggtc ccaactctct tccacctcgg gcagccaccc ctacacggcc gccctccagg
1021 cccccctcgc ggccatccag acccccgtct cacccctctg ctcatggttc tccagctcct
1081 gtctctacta tgcctaaacg catgtcttca gaagggcctc caaggatgtc cccaaaggcc
1141 cagcgacatc ctcgaaatca cagagtttct gctgggaggg gttccatatc cagtggccta
1201 gaatttgtat cccacaaccc acccagtgaa gcagctactc ctccagtagc aaggaccagt
1261 ccctcggggg gaacgtggtc atcagtggtc agtggggttc caagattatc ccctaaaact
1321 catagaccca ggtctcccag acagaacagt attggaaata cccccagtgg gccagttctt
1381 gcttctcccc aagctggtat tattccaact gaagctgttg ccatgcctat tccagctgca
1441 tctcctacgc ctgctagtcc tgcatcgaac agagctgtta ccccttctag tgaggctaaa
1501 gattccaggc ttcaagatca gaggcagaac tctcctgcag ggaataaaga aaatattaaa
1561 cccaatgaaa catcacctag cttctcaaaa gctgaaaaca aaggtatatc accagttgtt
1621 tctgaacata gaaaacagat tgatgattta aagaaattta agaatgattt taggttacag
1681 ccaagttcta cttctgaatc tatggatcaa ctactaaaca aaaatagaga gggagaaaaa
1741 tcaagagatt tgatcaaaga caaaattgaa ccaagtgcta aggattcttt cattgaaaat
1801 agcagcagca actgtaccag tggcagcagc aagccgaata gccccagcat ttccccttca
1861 atacttagta acacggagca caagagggga cctgaggtca cttcccaagg ggttcagact
1921 tccagcccag catgtaaaca agagaaagac gataaggaag agaagaaaga cgcagctgag
1981 caagttagga aatcaacatt gaatcccaat gcaaaggagt tcaacccacg ttccttctct
2041 cagccaaagc cttctactac cccaacttca cctcggcctc aagcacaacc tagcccatct
2101 atggtgggtc atcaacagcc aactccagtt tatactcagc ctgtttgttt tgcaccaaat
2161 atgatgtatc cagtcccagt gagcccaggc gtgcaacctt tatacccaat acctatgacg
2221 cccatgccag tgaatcaagc caagacatat agagcagtac caaatatgcc ccaacagcgg
2281 caagaccagc atcatcagag tgccatgatg cacccagcgt cagcagcggg cccaccgatt
2341 gcagccaccc caccagctta ctccacgcaa tatgttgcct acagtcctca gcagttccca
2401 aatcagcccc ttgttcagca tgtgccacat tatcagtctc agcatcctca tgtctatagt
2461 cctgtaatac agggtaatgc tagaatgatg gcaccaccaa cacacgccca gcctggttta
2521 gtatcttctt cagcaactca gtacggggct catgagcaga cgcatgcgat gtatgtttcc
2581 acgggctccc ttgctcagca gtatgcgcac cctaacgcta ccctgcaccc acatactcca
2641 caccctcagc cttcagctac ccccactgga cagcagcaaa gccaacatgg tggaagtcat
2701 cctgcaccca gtcctgttca gcaccatcag caccaggccg cccaggctct ccatctggcc
2761 agtccacagc agcagtcagc catttaccac gcggggcttg cgccaactcc accctccatg
2821 acacctgcct ccaacacgca gtcgccacag aatagtttcc cagcagcaca acagactgtc
2881 tttacgatcc atccttctca cgttcagccg gcgtatacca acccacccca catggcccac
2941 gtacctcagg ctcatgtaca gtcaggaatg gttccttctc atccaactgc ccatgcgcca
3001 atgatgctaa tgacgacaca gccacccggc ggtccccagg ccgccctcgc tcaaagtgca
3061 ctacagccca ttccagtctc gacaacagcg catttcccct atatgacgca cccttcagta
3121 caagcccacc accaacagca gttgtaaggc tgccctggag gaaccgaaag gccaaattcc
3181 ctcctccctt ctactgcttc tacca
//