LOCUS BC114510 1254 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens chromosome 18 open reading frame 45, mRNA (cDNA clone
MGC:138577 IMAGE:40023922), complete cds.
ACCESSION BC114510
VERSION BC114510.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1254)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1254)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 19 Row: d Column: 7
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1254
/db_xref="H-InvDB:HIT000340716"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138577 IMAGE:40023922"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GAGTAG"
gene 1..1254
/gene="C18orf45"
/db_xref="GeneID:85019"
/db_xref="HGNC:HGNC:31723"
CDS 54..533
/gene="C18orf45"
/codon_start=1
/product="C18orf45 protein"
/protein_id="AAI14511.1"
/db_xref="GeneID:85019"
/db_xref="HGNC:HGNC:31723"
/translation="MCVRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTL
IGGLLLHVSWKLGWVEINSSSRSHVLVWLPASVLFVGIIYAGSRALSRLAIPVFLTLH
NVAEVIICGYQKCFQKEKTSPAKICSALFLLAAAGCLPFNDSQGLIKFYRSPRNPVH"
BASE COUNT 271 a 309 c 330 g 344 t
ORIGIN
1 ccaggggatt tgggcaggca ccgtggatcc ccgagaaggg gacgagttga cagatgtgcg
61 tgaggaggtc tctggtcggc ctcacctttt gtacctgcta cctggcttct tacctcacga
121 acaagtatgt gctgtctgtc ttgaaattta cctaccctac attattccaa gggtggcaga
181 cgctcattgg tggacttttg cttcatgtgt cctggaaact gggctgggta gagatcaaca
241 gcagttcaag atctcatgtt cttgtgtggc ttcctgcttc agtgctgttt gtgggtataa
301 tctatgctgg gtccagagca ttgtccagac tggccattcc tgtgtttctc actttgcata
361 atgtagctga agttatcatc tgtgggtacc agaagtgttt tcagaaagag aaaacatctc
421 ctgcaaagat ctgtagtgcc ctcttcctcc tggccgcagc aggatgcctt cccttcaatg
481 actcccaggg gcttataaaa ttctacagaa gtcccagaaa cccagtgcat taagtgacat
541 tgaccagcaa tacttaaact atatattcag tgtggtgctc ctggcatttg catctcatcc
601 cacaggtgat ctcttcagcg tcctggactt cccattcctg tacttctaca gattccatgg
661 tagctgctgt gccagtggat ttttgggatt ctttctcatg ttcagtacag tgaagctaaa
721 aaaccttctg gccccagggc agtgtgcagc ctggattttc tttgctaaga taatcacagc
781 tggcttatca atattgctgt ttgatgcgat cctgaccagt gcaaccacgg gatgcctcct
841 gctcggtgcg cttggagagg ccttgctggt tttctcagag cggaagagct cctgaacaag
901 acggtcaaga gaaagactca caggctgctg cgggagaaca gcttgtacac ctgtgtacga
961 gcccctggtc tcatagctcc ctgttggatg tgtcagaaag aggaatgcaa ggacagtgag
1021 gccaggtggg cagtgccatc accctcaccc aagtgaatgt ggtggtggct gatgaggccg
1081 aggccctggt gcttcaagga gcaccctttc tgggggtctg caggtcactg cagaggagcg
1141 gtctgttaca tcttcccatt tggagaacct ctctcaaccg tgctgtagct ggttctgcag
1201 aaacaggaag tacaggattt catgggctgg ctctgctcgc ctcgactgag cttc
//