LOCUS BC114473 1634 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 8 family, member A1, mRNA (cDNA
clone MGC:138649 IMAGE:40033488), complete cds.
ACCESSION BC114473
VERSION BC114473.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1634)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1634)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 19 Row: g Column: 14.
FEATURES Location/Qualifiers
source 1..1634
/db_xref="H-InvDB:HIT000340700"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138649 IMAGE:40033488"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AATGTATA"
gene 1..1634
/gene="ALDH8A1"
/gene_synonym="ALDH12"
/gene_synonym="DJ352A20.2"
/db_xref="GeneID:64577"
/db_xref="HGNC:HGNC:15471"
/db_xref="MIM:606467"
CDS 582..1379
/gene="ALDH8A1"
/gene_synonym="ALDH12"
/gene_synonym="DJ352A20.2"
/codon_start=1
/product="ALDH8A1 protein"
/protein_id="AAI14474.1"
/db_xref="GeneID:64577"
/db_xref="HGNC:HGNC:15471"
/db_xref="MIM:606467"
/translation="MAAGNTVIAKPSELTSVTAWMLCKLLDKAGVPPGVVNIVFGTGP
RVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDANLDE
CIPATVRSSFANQVRSYVKRALAEGAQIWCGEGVDKLSLPARNQAGYFMLPTVITDIK
DESCCMTEEIFGPVTCVVPFDSEEEVIERANNVKYGLAATVWSSNVGRVHRVAKKLQS
GLVWTNCWLIRELNLPFGGMKSSGIGREGAKDSYDFFTEIKTITVKH"
BASE COUNT 399 a 403 c 459 g 373 t
ORIGIN
1 cagtcgtaaa gaggaaaggc agaatttttc cttgctatgg ctggaacaaa cgcacttttg
61 atgctggaaa acttcataga tggaaaattt ttaccttgta gctcatatat agattcttac
121 gacccatcaa caggggaagt gtattgcaga gtgccaaata gtggaaaaga cgagatcgaa
181 gccgcggtca aggccgccag agaagccttt cccagctggt catcccgcag cccccaggag
241 cgctcacggg tcctgaacca ggtggcggat ttgctggagc agtccctgga ggagtttgcc
301 caggccgagt ctaaagacca agggaaaacc ttagcactgg caagaaccat ggacattccc
361 cggtctgtgc agaacttcag gttcttcgct tcctccagcc tgcaccacac gtcagagtgc
421 acgcagatgg accacctggg ctgcatgcac tacacggtgc gggcccctgt gggagtcgtt
481 ccagggtaca cgtgcaggac gtgcaggttt gttacatagc tggtctgatc agcccctgga
541 atttgccact ctacttgctg acctggaaga tagctccagc gatggctgca gggaacactg
601 tgatagccaa gcccagtgag ctgacttcag tgactgcgtg gatgttgtgc aaactcctgg
661 ataaagcagg tgttccacca ggtgtggtca atattgtgtt tggaaccggg cccagggtgg
721 gtgaggccct ggtgtcccac ccagaggtgc ccctgatctc cttcaccggg agccagccca
781 ccgctgagcg gatcacccag ctgagcgctc cccactgcaa aaagctctcc ctggagctgg
841 ggggcaagaa tcctgccatc atctttgagg acgccaacct ggatgagtgc attccggcaa
901 ccgtcaggtc cagctttgcc aaccaggtca gaagttacgt caagagagct cttgctgaag
961 gtgcccaaat ttggtgcggt gagggagtgg ataagttgag cctccctgcc aggaaccagg
1021 caggctactt tatgcttccc acggtgataa cagacattaa ggatgaatcc tgctgcatga
1081 cggaagagat atttggtcca gtgacgtgtg tcgtcccctt tgatagtgaa gaggaggtga
1141 ttgaaagagc caacaacgtt aagtatgggc tggcggctac cgtgtggtcc agcaatgtgg
1201 ggcgcgtcca ccgggtggct aagaagctgc agtctggctt ggtctggacc aactgctggc
1261 tcatcaggga gctgaacctt cctttcgggg ggatgaagag ttctggaata ggtagagagg
1321 gagccaagga ctcttacgac ttcttcactg agatcaaaac catcaccgtt aaacactgat
1381 ctttgctaat ggtggagcca ctatggccaa tgcctggctg caggcatcag ttgttcaatg
1441 tggtagatga aaatcatggc atgaattcca gctatgcctt gacttggcag aaggttatct
1501 ctagcttatc ctcagttctt agtaacttta cccactagtg aagagatact gtctattttc
1561 aatgtggact cggaaaaaaa gacttataag taggaagata gaacaatgat gccagttgtc
1621 aggctcctcc cagg
//