LOCUS BC114469 1597 bp mRNA linear HUM 08-FEB-2007 DEFINITION Homo sapiens tripartite motif family-like 1, mRNA (cDNA clone MGC:138638 IMAGE:40033173), complete cds. ACCESSION BC114469 VERSION BC114469.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1597) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1597) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAR-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 19 Row: g Column: 4. FEATURES Location/Qualifiers source 1..1597 /db_xref="H-InvDB:HIT000340696" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:138638 IMAGE:40033173" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: AAGAAA" gene 1..1597 /gene="TRIML1" /gene_synonym="FLJ36180" /gene_synonym="RNF209" /db_xref="GeneID:339976" /db_xref="HGNC:HGNC:26698" CDS 69..1475 /gene="TRIML1" /gene_synonym="FLJ36180" /gene_synonym="RNF209" /codon_start=1 /product="tripartite motif family-like 1" /protein_id="AAI14470.1" /db_xref="GeneID:339976" /db_xref="HGNC:HGNC:26698" /translation="MSTADLMENLREELTCFICLDYFSSPVTTECGHSFCLVCLLRSW EEHNTPLSCPECWRTLEGPHFQSNERLGRLASIARQLRSQVLQSEDEQGSYGRMPTTA KALSDDEQGGSAFVAQSHGANRVHLSSEAEEHHREKLQEILNLLRVRRKEAQAVLTHE KERVKLCQEETKTCKQVVVSEYMKMHQFLKEEEQLQLQLLEQEEKENMRKLRNNEIKL TQQIRSLSKMIAQIESSSQSSAFESLEEVRGALERSEPLLLQCPEATTTELSLCRITG MKEMLRKFSTEITLDPATANAYLVLSEDLKSVKYGGSRQQLPDNPERFDQSATVLGTQ IFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKPPGDLFSLIGLKIGDDYSLWVS SPLKGQHVREPVCKVGVFLDYESGHIAFYNGTDESLIYSFPQASFQEALRPIFSPCLP NEGTNTDPLTICSLNSHV" BASE COUNT 445 a 394 c 446 g 312 t ORIGIN 1 acggcagtga gggctttgct aatcccagaa cagaggtgta acctggctgc atatccagcc 61 tcgagaaaat gtctacagca gatctgatgg agaacctcag ggaggaactc acctgtttca 121 tctgcttaga ctatttcagc agcccagtga ccaccgagtg tgggcacagc ttttgtctgg 181 tgtgtctcct caggagctgg gaggaacata acacaccttt atcttgtcct gagtgctgga 241 ggaccttgga gggcccgcat ttccagtcaa acgagcgtct ggggaggctg gccagcatcg 301 ccaggcagct ccggtcccag gtgctgcaga gcgaggatga gcagggcagc tacgggagga 361 tgcccaccac tgccaaggcg ctctccgatg atgagcaggg tggaagcgcc ttcgtagccc 421 agagccatgg tgcaaacaga gtgcatctct ccagcgaggc tgaggagcat cacagagaga 481 aactccagga aatcctgaat cttttgcgtg taaggagaaa ggaagctcag gctgtactaa 541 cccatgagaa ggagagagtg aaactgtgcc aggaagaaac aaagacttgt aaacaggttg 601 ttgtgtcaga atacatgaaa atgcaccagt tcctgaagga agaggagcag ctgcaactcc 661 agctactaga acaggaagag aaagagaaca tgaggaagct gaggaacaat gagatcaaac 721 tgacccagca aatcagaagc ctaagcaaaa tgatcgcaca gattgagtcc tcaagtcaaa 781 gctcggcttt cgaatctctt gaggaagtga gaggagccct ggaaaggagc gagccactct 841 tgcttcagtg tccagaggcc accaccacag agctgagtct gtgccgcatc acgggaatga 901 aggagatgct aagaaaattc agcacggaga taacgctgga cccagccaca gctaatgcct 961 atctcgtgtt gtcggaggat ctgaagagtg tgaaatatgg gggaagcaga cagcagctac 1021 ccgacaaccc ggaaagattt gaccagtctg cgactgtgct gggtactcag atcttcacca 1081 gtgggagaca ctactgggag gtggaggtgg gaaacaagac cgagtgggaa gtgggcatct 1141 gcaaggactc tgtgagcaga aaggggaatc tccccaagcc acctggggac ctgttctcac 1201 taataggttt aaaaatcgga gatgattaca gcctctgggt ctcgtcacct ttgaaaggtc 1261 agcacgtcag agagcctgtg tgtaaggttg gtgtcttcct ggactatgaa tctggacata 1321 tagcattcta caacgggacg gatgaatccc tcatctacag cttcccgcag gcttctttcc 1381 aagaggccct caggcctatc ttttccccct gcctcccaaa tgaggggaca aacacagacc 1441 ctctcaccat ctgctcactg aacagccacg tctgaggggc gtgccctgag ccgtcacagc 1501 gggcgatgtc tgagaccaag acacaactat taagacgatg aaggcatcga cagtattaat 1561 gtcaggtgat ctgaaataaa ctcccgtaac cccaccc //