LOCUS BC114450 2812 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis
1, RH-linked), mRNA (cDNA clone IMAGE:40001732), partial cds.
ACCESSION BC114450
VERSION BC114450.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 19 Row: a Column: 12.
FEATURES Location/Qualifiers
source 1..2812
/db_xref="H-InvDB:HIT000340678"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40001732"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TTTTTTGC"
gene <1..2812
/gene="EPB41"
/gene_synonym="4.1R"
/gene_synonym="HE"
/db_xref="GeneID:2035"
/db_xref="HGNC:HGNC:3377"
/db_xref="MIM:130500"
CDS <1..2230
/gene="EPB41"
/gene_synonym="4.1R"
/gene_synonym="HE"
/codon_start=2
/product="EPB41 protein"
/protein_id="AAI14451.1"
/db_xref="GeneID:2035"
/db_xref="HGNC:HGNC:3377"
/db_xref="MIM:130500"
/translation="PKSQVSEEEGKEVESDKEKGEGGQKEIEFGTSLDEEIILKAPIA
APEPELKTDPSLDLHSLSSAETQPAQEELREDPDFEIKEGEGLEECSKIEVKEESPQS
KAETELKASQKPIRKHRNMHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEED
YFGLAIWDNATSKTWLDSAKEIKKQVRGVPWNFTFNVKFYPPDPAQLTEDITRYYLCL
QLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEE
KVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVY
KDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCV
EHHTFFRLTSTDTIPKSKFLALGSKFRYSGRTQAQTRQASALIDRPAPHFERTASKRA
SRSLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAKKTVVPKAQKETVKAEVK
KEDEPPEQAEPEPTEAWKKKRERLDGENIYIRHSNLMLEDLDKSQEEIKKHHASISEL
KKNFMESVPEPRPSEWDKRLSTHSPFRTLNINGQIPTGEGPPLVKTQTVTISDNANAV
KSEIPTKDVPIVHTETKTITYEAAQTDDNSGDLDPGVLLTAQTITSETPSSTTTTQIT
KTVKGGISETRIEKRIVITGDADIDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETEIA
DE"
BASE COUNT 887 a 634 c 629 g 662 t
ORIGIN
1 gcccaaatct caggtgtccg aggaagaagg caaagaagta gagtcagata aagaaaaagg
61 tgaaggaggt cagaaagaga tagaatttgg aaccagtctt gatgaagaga tcattttaaa
121 ggccccaatt gcagctcctg aaccggaact caaaacagac ccatctttgg atcttcattc
181 attaagcagt gcagaaacac agcctgctca ggaagaactc agagaagatc cagattttga
241 aattaaggaa ggagaaggac ttgaagagtg ctccaaaata gaagtaaaag aagaaagccc
301 tcaatcaaaa gcagaaacag aattaaaagc ttcccaaaaa ccaatcagaa aacacaggaa
361 catgcactgc aaggtttctt tgttggatga cacagtttat gaatgtgttg tggagaaaca
421 tgctaaggga caagatttgc ttaaacgagt atgtgagcat ctcaatcttt tggaagaaga
481 ctattttggt ctagccattt gggataacgc aacctctaag acatggctgg attccgccaa
541 agaaataaaa aagcaggttc gtggtgtccc ttggaatttt acatttaatg taaagtttta
601 tccacctgac ccagcacagt taacagaaga cataacaaga tattatttat gtcttcagct
661 tcggcaggac atagttgcag gacgtctgcc ctgttccttt gcaaccttag cattattagg
721 ttcttacacc atccagtctg aactgggaga ctacgaccca gaactccatg gcgtggatta
781 tgttagtgat tttaaactgg ccccgaatca gaccaaggaa cttgaagaga aggtcatgga
841 actgcataag tcatacaggt ccatgactcc agctcaggct gacttggagt ttcttgagaa
901 tgccaaaaag ttgtctatgt atggagttga tcttcataaa gcaaaggact tggaaggagt
961 agatatcatc ctaggtgtct gctctagtgg ccttctggtt tacaaagata agctgagaat
1021 taaccgcttc ccttggccca aagtgctgaa gatttcttat aaacgtagta gctttttcat
1081 caagattcgg cctggagagc aagagcagta tgaaagtacc atcggattca aacttcccag
1141 ttaccgagca gctaagaaat tatggaaagt ctgtgtagaa catcacacgt ttttcagatt
1201 gacatctaca gacaccattc ccaaaagcaa atttcttgcg ctaggatcca aatttcgata
1261 cagtggccgg actcaagctc agaccaggca agctagtgct ctaattgaca ggcctgcccc
1321 acacttcgag cgtacagcaa gtaaacgggc gtcccggagc ctcgatggag cagcagctgt
1381 cgattcggca gaccgaagtc ctcggcccac ttctgcacct gccattactc agggtcaggt
1441 tgcagaaggt ggcgtcctag atgcctctgc taaaaaaaca gtggtcccta aagcacagaa
1501 ggaaacagtg aaggctgaag tgaaaaagga agacgagcca cctgagcaag ctgagccaga
1561 gcccacagaa gcatggaaga aaaagagaga aagactagat ggtgaaaaca tttatatcag
1621 acatagcaat ttaatgttgg aggatttaga caagagtcaa gaggagatca aaaaacatca
1681 tgccagcatc agtgagctga aaaagaactt catggagtct gtaccagaac cacggcctag
1741 tgaatgggat aaacgcttat ccactcactc acccttccga actcttaaca tcaatgggca
1801 aatccccaca ggagaaggac ctcccctggt gaagacacaa actgtcacca tctcagataa
1861 tgccaatgct gtgaaaagtg aaatcccaac caaagacgtc cctattgtcc acactgagac
1921 caagaccatc acttatgagg ctgcccagac tgacgacaac agtggagact tggacccagg
1981 agtcttgctg acagctcaaa ctatcacatc tgagacccca agcagcacca ccacaactca
2041 aattaccaag actgtaaaag gtgggatttc agagacacgt attgaaaaga gaattgtgat
2101 cacaggagat gctgatattg accatgatca ggtccttgta caagccatca aggaggcaaa
2161 ggagcagcac ccagacatgt cagtgaccaa ggtggtcgtc caccaggaga ccgagattgc
2221 tgatgagtga gctcaggaac taacctaccc caactctgcc cttctcccat ccaagagaaa
2281 ccagcaaaat gataaagaag ctaacctgcc atagtcagac ttcagacttt caagattatt
2341 ctaaatcacc agaaaattaa tttcagtttc tattgggagt ttataccaag agattcttct
2401 agatctcatt gatccttttg aagagctttt tctatattag gatatcagaa ttgttcaact
2461 tttcactcta tagactgttt taagagtttt ggggtttttt taattgggtg gtttgtaacc
2521 ccttcagcct agcctctctg cccatttatt tccaacccca acagacactg acagggtcca
2581 cggaattctt cgggaaatcc tccaaggact cttgtcagct gtgttggagg ccaaagccag
2641 cttagtggga cttccgcgtc tctccctagt cttatcccct ttggatgatg gcagaaactt
2701 catgaaccag ccctttctca gagccagtga tgtgagtgta tcagaatgcc agggagggca
2761 ccagccctga tccacagacc tcggaaagat gcccctgttc ctttgttgcg gg
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