LOCUS BC114217 2607 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens solute carrier family 8 (sodium/calcium exchanger),
member 3, mRNA (cDNA clone IMAGE:5194668), with apparent retained
intron.
ACCESSION BC114217
VERSION BC114217.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2607)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2607)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33946307
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2607
/db_xref="H-InvDB:HIT000340642"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5194668"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 847 a 538 c 598 g 624 t
ORIGIN
1 cgaaaaccta gggaatgaca gctagaggca tccagacgat aactggcagc caggagggtg
61 gataagtcaa aggaaggggt caaggaaaga ggggaaggaa agggaaccat cacttgctga
121 gcctgctgcc tgtgctttct catgtcaccc gcacgacaac ccaatgtgaa tgttatcatc
181 tccaggtaac tgctgaagaa acggaagctc aaagagatgt gacagacagg aagctgacta
241 tggaagaaga ggaggccaag aggatagcag agatgggaaa gccagtattg ggtgaacacc
301 ccaaactaga agtcatcatt gaagagtcct atgagttcaa gactacggtg gacaaactga
361 tcaagaagac aaacctggcc ttggttgtgg ggacccattc ctggagggac cagttcatgg
421 aggccatcac cgtcagtgca gcaggggatg aggatgagga tgaatccggg gaggagaggc
481 tgccctcctg ctttgactac gtcatgcact tcctgactgt cttctggaag gtgctgtttg
541 cctgtgtgcc ccccacagag tactgccacg gctgggcctg cttcgccgtc tccatcctca
601 tcattggcat gctcaccgcc atcattgggg acctggcctc gcacttcggc tgcaccattg
661 gtctcaaaga ttcagtcaca gctgttgttt tcgtggcatt tggcacctct gtcccaggtg
721 agagtgagag gtgcttgaat ttgcaaagag gattttacct ggttcaaatg acccctggac
781 tccatctcat tatcttccac accatctcag atctgaactt aacagagcct ctgcccttaa
841 agtgcacaaa agtcaatcaa agagatgaat aatgacatta gtaatgacag ctaatatttc
901 ttgagcactt tcaatgtgac agacaccatg tgtgttcagc aatttacaca tttacatttt
961 ccccctgtaa tgtttcccaa agccctatta aatagggtaa gttattatcc ccacttcaca
1021 gacaaagaaa ctgaggccca cagaggttaa gctacatgcc caagtaagtg gtccaatttc
1081 ttaacctcca cattatgtga gtagaccaca aacagtgaaa ttaaaagaat gtagatattg
1141 ttctccttct atttacctct ggcgatctct gagaggttaa agattagcca gctcaaagat
1201 atcaaaggag aaatgcccac atacattctt ggcctcctct acttggaagg acactgtgag
1261 tacaaagtat ctcctagcag gacagccaaa ggaagttcca cagcttttat ctttttatag
1321 gatgaattac atactctttc tttttcttag gaacactcag agacaaacag aaaggagcgg
1381 acattccttt actcattgaa caaatattta ctgagcacct attatgcctg ttacagtatt
1441 gtgctagttt ttgggactat agtgaaaggc aagatacaca tgcttccttc tccacgtgga
1501 gtttataatc tactgaagga ggcaactctc aactactata attaaagtta tcttgttaaa
1561 tcctaggaag aaaaagaaaa ggtactgcat acggaaggaa gttgggcctg aatgtaggag
1621 ttagcaggta gacaggggct gcactagccc aggttcttta cttaattcag ttaggggctt
1681 tggggcctct gaactctgaa cttctgccag ggagctggca tcccagttgc cccagaaaga
1741 aacagagcac atcctcctgc agggaagtta ggctgaatct catcagacag gacttttctg
1801 gctgggccaa gggaaatctt tcctgtacca agcaaacata tccttcaaga gagtagctga
1861 attcacatca aattctagga aaacctcttt ccaaaacccc agcgcaggcc agcggtatta
1921 tttgtccatt agtgatgcaa gagatttagc tatcgtggaa atgcatcaga aggttggaaa
1981 ttagatggat gatcccagga aggcctgtgg atgagatgcc ctgtgatctc tgttctccaa
2041 gccttggggg acctgaacta tcagagggga gggaggaaat atgggggaaa gcatagaggt
2101 gggaagaaat atcagaggat cagaagcaaa aaacaacaat aacaacagaa acaaaaacaa
2161 acaaacaaac aaaaaaacaa ggccataggc aagaaagggt aagaggtttt ctctgggaga
2221 tctaaaaaaa atggcaataa tgaggtaagc caggcagata cctttgggca tctccaagtc
2281 cttgcaattg gccaagacaa cagctaacaa catttgaggc tttaagaagg ttaccctgtg
2341 atccactcat ctgatttagt ggctttggct gaagctcttt ggatatagtt gaaggtatgg
2401 aaagggtcct tacatgagga ctttagggtc aagtgtcttg ctaacatcct atgtgacctt
2461 gggtaaattc tttgaccctt atttttctta cctgtaaaat aaaagaattg ggctagatgt
2521 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaa
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