LOCUS BC114215 2217 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens protein tyrosine phosphatase-like A domain containing
2, mRNA (cDNA clone MGC:131700 IMAGE:5174279), complete cds.
ACCESSION BC114215
VERSION BC114215.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2217)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2217)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 255 Row: d Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58219057.
FEATURES Location/Qualifiers
source 1..2217
/db_xref="H-InvDB:HIT000340640"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:131700 IMAGE:5174279"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2217
/gene="PTPLAD2"
/gene_synonym="DKFZp686F01145"
/gene_synonym="DKFZp686G24132"
/db_xref="GeneID:401494"
/db_xref="HGNC:HGNC:20920"
CDS 20..718
/gene="PTPLAD2"
/gene_synonym="DKFZp686F01145"
/gene_synonym="DKFZp686G24132"
/codon_start=1
/product="PTPLAD2 protein"
/protein_id="AAI14216.1"
/db_xref="GeneID:401494"
/db_xref="HGNC:HGNC:20920"
/translation="MGPLALPAWLQPRYRKNAYLFIYYLIQFCGHSWIFTNMTVRFFS
FGKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVGIESNHLLPRFLQLTERIIILFVVI
TSQEEVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPIYPLCV
LAEAFAIYQSLPYFESFGTYSTKLPFDLSIYFPYVLKIYLMMLFIGMYFTYSHLYSER
RDILGIFPIKKKKM"
BASE COUNT 715 a 433 c 410 g 659 t
ORIGIN
1 gccctggcgg cggcggccca tggggccctt ggcgctgccc gcctggctgc agcccaggta
61 taggaagaat gcgtatcttt tcatctatta cttaatccag ttctgtggcc actcttggat
121 atttacaaat atgacagtca gattcttttc atttggaaaa gattcaatgg ttgacacttt
181 ttatgctatt ggacttgtga tgcgactttg ccaatccgta tctctcctgg aactgctgca
241 catatatgtt ggcattgagt caaaccatct tctcccaagg tttttgcagc tcacagaaag
301 aataatcatc ctttttgtgg tgatcaccag tcaagaggaa gtccaagaga aatatgtggt
361 gtgtgtttta ttcgtctttt ggaatctatt ggatatggtt aggtacactt atagcatgtt
421 atcagtcata ggaatatcct atgctgtctt gacatggctc agtcaaacac tatggatgcc
481 aatttatcct ttgtgtgttc ttgctgaagc atttgccatc tatcaatcgc tgccttattt
541 tgaatcattt ggcacttatt ccaccaagct gccctttgac ttatccatct atttcccata
601 tgtgctgaaa atatatctca tgatgctctt tataggtatg tattttacct acagtcatct
661 atactcagaa agaagagaca tcctcggaat ctttcccatt aaaaaaaaga agatgtgaag
721 tacagcattc cagtgtgaca cgagaaaaga caggctgtgg attcagtgca gtaaataaaa
781 cacaggaagt attctggtgg aaaaatacct tgtatttgat aaaaatccat tacatgaaat
841 aactgcacat acccccaaaa ctctagacat aacaggctat gtttttcaca cattgtattt
901 ttaagacata tatattctcc ataccctgct tcaccaaaat tcctgcttca tttggatttt
961 atacaagtta tacttacatt gtatgaagtc tgattatttt cctgtaagtt taatgagaaa
1021 taggagatta gctgcaatag attcaattaa attaagaaac caaacttgat aacctaaatt
1081 acatgtattc tttttcactt ccaagttccc aaatagatct gtaggagaag agggatggaa
1141 aatatattcc acagttgcct agaataacat atttcataga cagatgtctg tcttcagatc
1201 taataatact caccctaaac attagatatg tttagaaaat taaatatctt tccaagccct
1261 atgtcttagc tcaggttgct ataatagaac accataaacc gaatggctta aacaacagca
1321 aacgcttctc acagttctgg aggctgggaa ttccgctcag gatcaaggca tcagctaatg
1381 cagtttctgg acccagtgag gcagaggtat tgcccccagg actatgttgg aggaggatga
1441 cccccatatc accaggcgga agctgtcagg cctgttgaaa ccaaggcaat gactgcccct
1501 tttgaaactg agaagcaggg agaagataat atcttcaagc tttcacaaag aaaatctcca
1561 cattgaactc aagccaaata aagaaaatcc aagttcctgt ttcagtctca actggcccgg
1621 gtactaaagc aatgcactcc tctcttagga ggcatgtgtc aagctgtcag tgatgtggcc
1681 atcttttcat gacccttaac tctctgcatc atgtctcagc aataccaggc atgaattctg
1741 aaaaacttct tccacttata tggttttcct catccagctg agaatgctgc tggttactgc
1801 aaaactgttc accaaccata tgctctggtc catacagctt tcttcttaaa ctctgggaga
1861 actctcaagg acagcagggt ggctaagggg acaaaatata ggtatggctg catttgaaaa
1921 ggtcattttg atcaaaaagg tgtcagaaca gaatttgtct ttttctcact tggctaatgt
1981 tcaagactag ggagttccat cgatattttg gcaggatttt aatggcagaa aaccatttat
2041 aaatgttggg gggaaagttg tttgtttttt tttttttttt aagttaccct gcaatcagtt
2101 aatgggaaat tttgcagaat taaaatgaaa gctgaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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