LOCUS BC113963 872 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens cell adhesion molecule 4, mRNA (cDNA clone
IMAGE:40023999), partial cds.
ACCESSION BC113963
VERSION BC113963.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 872)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 872)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 2 Row: d Column: 8.
FEATURES Location/Qualifiers
source 1..872
/db_xref="H-InvDB:HIT000340621"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40023999"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: ATCTAA"
gene <1..872
/gene="CADM4"
/gene_synonym="Necl-4"
/gene_synonym="synCAM4"
/gene_synonym="TSLL2"
/db_xref="GeneID:199731"
/db_xref="HGNC:HGNC:30825"
/db_xref="IMGT/GENE-DB:IGSF4C"
/db_xref="MIM:609744"
CDS <1..789
/gene="CADM4"
/gene_synonym="Necl-4"
/gene_synonym="synCAM4"
/gene_synonym="TSLL2"
/codon_start=1
/product="CADM4 protein"
/protein_id="AAI13964.1"
/db_xref="GeneID:199731"
/db_xref="HGNC:HGNC:30825"
/db_xref="IMGT/GENE-DB:IGSF4C"
/db_xref="MIM:609744"
/translation="LQVPGREQAVEGGEVELSCLVPRSRPAATLRWYRDRKELKGVSS
SQENGKVWSVASTVRFRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTARI
HASQAVVREGDTLVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSADN
GTYTCEASNKHGHARALYVLVVYDPGAVVEAQTSVPYAIVGGILALLVFLIICVLVGM
VWCSVRQKGSYLTHEASGLDEQGEAREAFLNGSDGHKRKEEFFI"
BASE COUNT 177 a 242 c 299 g 154 t
ORIGIN
1 ctgcaggtgc cgggccggga gcaggcggta gagggcggcg aggtggagct cagctgcctc
61 gttccgcggt cccgtccggc tgccaccctg cgctggtacc gggaccgcaa ggagctgaaa
121 ggagtgagca gcagccagga aaatggcaag gtctggagcg tggcaagcac agtacggttt
181 cgtgtggacc gtaaggacga cggtggtatc atcatctgtg aggcgcagaa ccaggcgctg
241 ccctccggac acagcaagca gacgcagtac gtgctggatg tgcagtactc ccccacggcc
301 cggattcatg cctcccaagc tgtggtgagg gagggagaca cgctggtgtt gacgtgtgct
361 gtcacgggga accccaggcc aaaccagatc cgctggaacc gcgggaatga gtctttgccg
421 gagagggcgg aggccgtggg agagacgctc acgctgccgg gtctggtatc cgcggataac
481 ggcacctaca cttgcgaggc gtccaataag cacggccatg cgagggcgct ctacgtactt
541 gtggtctacg accctggtgc ggtggtagag gctcagacgt cggttcccta tgccattgtg
601 ggcggcatcc tggcgctgct ggtgtttctg atcatatgtg tgctagtggg catggtctgg
661 tgctcggtac ggcagaaggg ttcctatctg acccacgaag ccagtggctt ggatgaacag
721 ggagaagcaa gagaagcctt cctcaatggc agcgacggac acaagaggaa agaggaattc
781 ttcatctgac cctatcccca ccccaggcct aggcctgggc ctgggctggg gtccccccca
841 ctgccagctg caaggaacca gcaaagacat tt
//