LOCUS BC113906 566 bp mRNA linear HUM 29-JUN-2006 DEFINITION Homo sapiens sal-like 1 (Drosophila), mRNA (cDNA clone IMAGE:40081792), complete cds. ACCESSION BC113906 VERSION BC113906.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 566) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 566) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 19 Row: k Column: 18 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..566 /db_xref="H-InvDB:HIT000387213" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40081792" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: TAAGA" gene 1..566 /gene="SALL1" /gene_synonym="HSAL1" /db_xref="GeneID:6299" /db_xref="HGNC:HGNC:10524" /db_xref="MIM:602218" CDS 73..516 /gene="SALL1" /gene_synonym="HSAL1" /codon_start=1 /product="SALL1 protein" /protein_id="AAI13907.1" /db_xref="GeneID:6299" /db_xref="HGNC:HGNC:10524" /db_xref="MIM:602218" /translation="MVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDL AARSGSGDPSSFWNQYAAALSNGLAMKANEISVIQNGGIPPIPGSLGSGNSSPISGLT GNLERLQNSEPNAPLAGLEKMASSENGTNFRFTRFVEDSKEIVTS" BASE COUNT 138 a 161 c 162 g 105 t ORIGIN 1 tgtcgcggag gaagcaagcg aagcctcaac atttccaatc cgaccccgaa gtggcctcgc 61 tcccccggcg agatggtaca catgggcact cacatgtgga atagcacccc tgcacgacgg 121 ggtcggcggc tctctgtgga tggccccatg acatttctag gaggcaatcc cgtcaagttc 181 ccagaaatgt tccagaagga tttggcggca agatcaggaa gtggggatcc ttccagcttc 241 tggaatcagt atgcagcagc gctctccaac gggctggcga tgaaggccaa cgagatctcc 301 gtcattcaga acggtggcat ccctccaatt cctggaagcc tcggcagtgg gaacagctca 361 cctattagtg ggctgacggg aaacctggag aggctccaga actcagagcc caatgctccc 421 ctggccggcc tggagaaaat ggcaagcagt gagaacggaa ccaacttccg cttcacccgc 481 ttcgtggagg acagcaagga gatcgtcacg agttaaagca gctcgggctg gagacatagc 541 attcattcct gttcagaatg cgacct //