LOCUS BC113867 1648 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens apolipoprotein L, 1, mRNA (cDNA clone IMAGE:40034502), partial cds. ACCESSION BC113867 VERSION BC113867.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1648) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1648) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 19 Row: g Column: 19. FEATURES Location/Qualifiers source 1..1648 /db_xref="H-InvDB:HIT000340592" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40034502" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: TTAAGACC" gene <1..1648 /gene="APOL1" /gene_synonym="APO-L" /gene_synonym="APOL-I" /db_xref="GeneID:8542" /db_xref="HGNC:HGNC:618" /db_xref="MIM:603743" CDS <1..1295 /gene="APOL1" /gene_synonym="APO-L" /gene_synonym="APOL-I" /codon_start=3 /product="APOL1 protein" /protein_id="AAI13868.1" /db_xref="GeneID:8542" /db_xref="HGNC:HGNC:618" /db_xref="MIM:603743" /translation="RITGGGIHTAQNSWILLSLCQGKIPWRRPCSDMEGAALLRVSVL CIWMSALFLGVGVRAEEAGARVQQNVPSGTDTGDPQSKPLGDWAAGTMDPESSIFIED AIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQMIMKDKN WHDKGQQYRNWFLKEFPRLKSKLEDNIRRFRALADGVQKVHKGTTIANVVSGSLSISS GILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTIDYGKKWWTQAQAHDLV IKSLDKLKEVKEFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASAS RPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLH EGAKSETAEELKKVAQELEEKLNILNNNYKILQADQEL" BASE COUNT 478 a 377 c 461 g 332 t ORIGIN 1 gacgcataac tggaggtggg atccacacag ctcagaacag ctggatcttg ctcagtctct 61 gccaggggaa gattccttgg aggaggccct gcagcgacat ggagggagct gctttgctga 121 gagtctctgt cctctgcatc tggatgagtg cacttttcct tggtgtggga gtgagggcag 181 aggaagctgg agcgagggtg caacaaaacg ttccaagtgg gacagatact ggagatcctc 241 aaagtaagcc cctcggtgac tgggctgctg gcaccatgga cccagagagc agtatcttta 301 ttgaggatgc cattaagtat ttcaaggaaa aagtgagcac acagaatctg ctactcctgc 361 tgactgataa tgaggcctgg aacggattcg tggctgctgc tgaactgccc aggaatgagg 421 cagatgagct ccgtaaagct ctggacaacc ttgcaagaca aatgatcatg aaagacaaaa 481 actggcacga taaaggccag cagtacagaa actggtttct gaaagagttt cctcggttga 541 aaagtaagct tgaggataac ataagaaggt tccgtgccct tgcagatggg gttcagaagg 601 tccacaaagg caccaccatc gccaatgtgg tgtctggctc tctcagcatt tcctctggca 661 tcctgaccct cgtcggcatg ggtctggcac ccttcacaga gggaggcagc cttgtactct 721 tggaacctgg gatggagttg ggaatcacag cagctttgac cgggattacc agcagtacca 781 tagactacgg aaagaagtgg tggacacaag cccaagccca cgacctggtc atcaaaagcc 841 ttgacaaatt gaaggaggtg aaggagtttt tgggtgagaa catatccaac tttctttcct 901 tagctggcaa tacttaccaa ctcacacgag gcattgggaa ggacatccgt gccctcagac 961 gagccagagc caatcttcag tcagtaccgc atgcctcagc ctcacgcccc cgggtcactg 1021 agccaatctc agctgaaagc ggtgaacagg tggagagagt taatgaaccc agcatcctgg 1081 aaatgagcag aggagtcaag ctcacggatg tggcccctgt aagcttcttt cttgtgctgg 1141 atgtagtcta cctcgtgtac gaatcaaagc acttacatga gggggcaaag tcagagacag 1201 ctgaggagct gaagaaggtg gctcaggagc tggaggagaa gctaaacatt ctcaacaata 1261 attataagat tctgcaggcg gaccaagaac tgtgaccaca gggcagggca gccaccagga 1321 gagatatgcc tggcaggggc caggacaaaa tgcaaacttt tttttttttc tgagacagag 1381 tcttgctctg tcgccaagtt ggagcttgca gtgagccgag atatcgccac tgcactccag 1441 cctgggtgac agagcgagac tccatctcaa aaaaaaaaaa aaaaaagaat atattgacgg 1501 aagaatagag aggaggcttg aaggaaccag caatgagaag gccaggaaaa gaaagagctg 1561 aaaatggaga aagcccaaga gttagaacag ttggatacag gagaagaaac agcggctcca 1621 ctacagaccc agccccaggt tcaatgtc //