LOCUS BC113813 639 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens syntrophin, alpha 1 (dystrophin-associated protein A1,
59kDa, acidic component), mRNA (cDNA clone IMAGE:40022326), partial
cds.
ACCESSION BC113813
VERSION BC113813.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 639)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 639)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 2 Row: b Column: 11.
FEATURES Location/Qualifiers
source 1..639
/db_xref="H-InvDB:HIT000340554"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40022326"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: AGTAAACA"
gene <1..>639
/gene="SNTA1"
/gene_synonym="dJ1187J4.5"
/gene_synonym="TACIP1"
/db_xref="GeneID:6640"
/db_xref="HGNC:HGNC:11167"
/db_xref="MIM:601017"
CDS <1..>639
/gene="SNTA1"
/gene_synonym="dJ1187J4.5"
/gene_synonym="TACIP1"
/codon_start=3
/product="SNTA1 protein"
/protein_id="AAI13814.1"
/db_xref="GeneID:6640"
/db_xref="HGNC:HGNC:11167"
/db_xref="MIM:601017"
/translation="GSGCTSSPGPTPRNFSEAKHMSLKMAYVSKRCTPNDPEPRYLEI
CSADGQDTLFLRAKDEASARSWATAIQAQVNTLTPRVKDELQALLAATSTAGSQDIKQ
IGWLTEQLPSGGTAPTLALLTEKELLLYLSLPETREALSRPARTAPLIATRLVHSGPS
KGSVPYDAELSFALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCPRPARG"
BASE COUNT 124 a 220 c 186 g 109 t
ORIGIN
1 atggcagcgg ctgcacttcc tcccctggcc ccacaccccg gaacttcagc gaggccaaac
61 acatgtcctt gaagatggca tatgtctcga agaggtgcac ccccaatgac ccggagccca
121 ggtatctgga gatctgctcg gcagatggtc aagacaccct cttcctgagg gccaaggatg
181 aggctagtgc gaggtcgtgg gcgactgcca tccaagccca ggtcaatact ctgacgccgc
241 gggtcaagga tgagctgcag gcactgttgg cagccaccag cacagctggg agccaggaca
301 tcaagcagat tggctggcta actgagcagc tgcccagtgg gggcacagcc cccaccctgg
361 ccctgctaac tgaaaaggaa ctgctcctct acttgtctct ccccgagacc cgcgaggccc
421 tgagccggcc agcccgtact gccccactca tcgccaccag actggtgcac tcaggcccct
481 ccaagggctc agtgccctac gatgcagagc tctcttttgc cctgcgcacg ggcacgcgtc
541 acggtgtgga cactcacctg ttcagcgtgg agtcaccgca ggagctggct gcctggaccc
601 gccagcttgt ggatggctgt ccccggcccg cccggggat
//