LOCUS BC113811 1020 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens transmembrane protein 63A, mRNA (cDNA clone
IMAGE:40016788), complete cds.
ACCESSION BC113811
VERSION BC113811.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1020)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1020)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 2 Row: a Column: 12
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1020
/db_xref="H-InvDB:HIT000340552"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40016788"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TTGTGTC"
gene 1..1020
/gene="TMEM63A"
/gene_synonym="KIAA0489"
/gene_synonym="RP4-559A3.1"
/db_xref="GeneID:9725"
/db_xref="HGNC:HGNC:29118"
CDS 642..890
/gene="TMEM63A"
/gene_synonym="KIAA0489"
/gene_synonym="RP4-559A3.1"
/codon_start=1
/product="TMEM63A protein"
/protein_id="AAI13812.1"
/db_xref="GeneID:9725"
/db_xref="HGNC:HGNC:29118"
/translation="MKDRLLERITEEERHVQDQPLGMAFVTFQEKSMATYILKDFNAC
KCQSLQCKGEPQPSSHSRELYTSKWTVTFAADPEDICW"
BASE COUNT 238 a 279 c 286 g 217 t
ORIGIN
1 atgcccgccg agaactctcc agctccctgc ctgggatccc agccctgatg gcaggtggtt
61 tccctctcag caatgacctc ctttggctgc acaccatctt tgctgtcatt tacctcttcc
121 tcactgtggg tttcatgcgg caccacactc agtccattaa gtacaaagag gagaacctgt
181 ctcctgccat gcaaagaagg ctcatagagt tgctttggaa gtggattctt tgtacagcct
241 ggaagaagac gctgtaggct ggagttgggt aggaaacctg agcataccgg cacactggct
301 tgtgggtgac ttctctccct gctgtatttc ccggacaggt gaggcggacc ctgttcatca
361 caggactccc cagagatgcc aggaaggaga ctgtggagag ccacttccgg gacgcgtatc
421 ccacgtgtga ggtggttgat gtgcagctgt gctacaacgt ggccaaactg atctacctgt
481 gcaaggagaa aaagaagact gagaagagcc tgacctatta cacaaacctg caggtgaaga
541 caggccagcg gaccctcatc aaccccaagc cctgtggcca gttttgctgc tgtgaagtgc
601 tgggctgtga gtgggaagac gccatctctt actacacacg gatgaaggac aggctgctgg
661 agaggatcac agaggaagaa cgccacgtcc aggaccagcc cctgggaatg gccttcgtca
721 ccttccagga gaagtccatg gccacctaca tcctgaaaga tttcaatgcc tgcaagtgtc
781 agagccttca gtgcaaaggt gagccccagc cgtcctccca tagcagggag ctctatacct
841 ccaagtggac agtcaccttt gctgctgacc ctgaggacat ctgctggtaa gctcctagac
901 caaggagagg tgggagagag gcctgggttc ctggtgggag ctgcccatca cctggagcac
961 aggtgtgacc tggcagtcaa tggagatctc cacacatctg cagtgggcag tgatgcttaa
//