LOCUS       BC113745                2734 bp    mRNA    linear   HUM 06-JUN-2006
DEFINITION  Homo sapiens cadherin 9, type 2 (T1-cadherin), mRNA (cDNA clone
            MGC:125386 IMAGE:40011941), complete cds.
ACCESSION   BC113745
VERSION     BC113745.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2734)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2734)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 12 Row: i Column: 21.
FEATURES             Location/Qualifiers
     source          1..2734
                     /db_xref="H-InvDB:HIT000340546"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:125386 IMAGE:40011941"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_282"
                     /note="Vector: pCR-Blunt II-TOPO; Clone identification
                     sequence tag: AGTTAGTC"
     gene            1..2734
                     /gene="CDH9"
                     /db_xref="GeneID:1007"
                     /db_xref="HGNC:HGNC:1768"
                     /db_xref="MIM:609974"
     CDS             132..2501
                     /gene="CDH9"
                     /codon_start=1
                     /product="cadherin 9, type 2, preproprotein"
                     /protein_id="AAI13746.1"
                     /db_xref="GeneID:1007"
                     /db_xref="HGNC:HGNC:1768"
                     /db_xref="MIM:609974"
                     /translation="MRTYHCIPLFIWTYMFHTVDTILLQEKPNSYLSSKKIVGLTKDD
                     GKMLRRTKRGWMWNQFFLLEEYTGTDTQYVGKLHTDQDKGDGNLKYILTGDGAGSLFV
                     IDENTGDIHAAKKLDREEKSLYILRAKAIDRKTGRQVEPESEFIIKIHDINDNEPKFT
                     KDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQPYFSVDPESGIIK
                     TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFN
                     SPESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQN
                     LDFENQMLYTLRVDASNTHPDPRFLHLGPFKDTAVVKISVEDIDEPPVFTKVSYLIEV
                     DEDVKEGSIIGQVTAYDPDARNNLIKYSVDRHTDMDRIFGIHSENGSIFTLKALDRES
                     SPWHNITVTATEINNPKQSSHIPVFIRILDINDHAPEFAMYYETFVCENAKPGQLIQT
                     VSVMDKDDPPRGHKFFFEPVPEFTLNPNFTIVDNKDNTAGIMTRKDGYSRNKMSTYLL
                     PILIFDNDYPIQSSTGTLTIRVCACDNQGNMQSCTAEALILSAGLSTGALVAILLCVL
                     ILLILVVLFAALKRQRKKEPLIISKDDVRDNIVTYNDEGGGEEDTQAFDIGTLRNPEA
                     REDSKLRRDVMPETIFQIRRTVPLWENIDVQDFIHRRLKENDADPSAPPYDSLATYAY
                     EGNDSIADSLSSLESLTADCNQDYDYLSDWGPRFKKLADMYGGDDSDRD"
BASE COUNT          907 a          534 c          590 g          703 t
ORIGIN      
        1 gggaagagaa ggaccgagac agaagcaaca acggaactgt cagtgcggag tagggctaaa
       61 ctcagttcca ttgttaagca aggaaaaaca aacaatacat tgaatttgac aacccactga
      121 agttgcagat aatgaggact taccattgta taccattatt catctggacc tatatgttcc
      181 atacagttga caccatccta ttacaagaaa aacctaacag ttatttatca agcaaaaaga
      241 tagtgggtct gacaaaagat gacggtaaaa tgctacgtcg caccaagcgt ggctggatgt
      301 ggaatcagtt cttcttattg gaagagtaca caggtactga cacacaatat gtaggcaagc
      361 ttcacactga ccaagataaa ggagatggaa atttaaaata catactaaca ggagatgggg
      421 ctggcagtct atttgttata gatgaaaata caggagacat tcatgctgca aagaaactag
      481 acagagaaga aaaatctctg tacattcttc gtgccaaggc tatagacaga aaaactgggc
      541 ggcaggtgga accggaatcg gaatttatca ttaaaataca tgatatcaat gacaatgagc
      601 caaaatttac aaaagactta tacactgcca gtgttcctga aatgtctgga gtcggtacat
      661 ctgttataca agtaactgca acagatgcag atgacgccaa ctatggaaat agtgccaaag
      721 tggtctatag catattgcaa ggacagccat atttttcagt ggacccagaa tcaggcataa
      781 taaaaactgc attaccagac atgagcagag aaaatagaga gcagtaccag gttgttatac
      841 aggccaaaga catgggtggc cagatgggag gcctttctgg aaccaccaca gtgaacatca
      901 cgctgacaga tgtcaacaac aaccctcctc gatttcccca gagtacgtat caatttaatt
      961 ctcctgagtc tgtacctctt ggaactcatc ttggaaggat aaaagccaat gaccctgacg
     1021 tgggggaaaa tgcagaaatg gagtatagca ttgctgaagg agatggtgca gacatgttcg
     1081 atgtcatcac tgacaaggat acacaggaag ggattataac tgtcaaacag aatttagatt
     1141 ttgaaaatca aatgctctat actttaagag tggatgcaag taacactcac cctgatccac
     1201 gattcttaca cctgggacct ttcaaagata cagctgtggt caaaatatct gtggaagata
     1261 tagatgagcc tcctgtgttc actaaagtct cttacttgat agaagtagat gaagatgtaa
     1321 aggagggcag tatcattgga caggttacag catacgatcc agatgccagg aacaatttaa
     1381 taaagtactc tgttgatcgg catactgata tggaccgtat ttttggtatt cactcagaaa
     1441 atggttctat tttcactttg aaagcccttg accgggaatc atctccttgg cataacatca
     1501 ctgttacagc cacagaaata aataacccaa aacaaagtag ccacatccct gtcttcatca
     1561 gaattctaga tataaatgac catgctccgg aatttgccat gtattatgaa acatttgttt
     1621 gtgaaaatgc aaaacctggg cagttgattc agactgtcag tgtcatggat aaggatgacc
     1681 ctccccgagg tcacaaattc ttttttgaac cagtgccaga atttactctc aatccgaatt
     1741 tcaccattgt agataataaa gataatacag caggaatcat gactcggaaa gatggctaca
     1801 gtcgcaacaa aatgagcacc tacttattgc cgattttaat ctttgacaac gattatccaa
     1861 ttcaaagcag cactggtaca ctcactatcc gtgtgtgtgc ctgcgataat caaggaaaca
     1921 tgcaatcctg caccgcagaa gccctgatcc tttcagccgg cctgagcacg ggagctctcg
     1981 ttgcgattct actctgtgtc ctcatactgc ttattttagt cgtgttgttt gctgcattga
     2041 agaggcaaag aaaaaaggaa cctctgataa tttcaaaaga cgatgtccgg gacaacattg
     2101 tgacctacaa cgatgaaggc ggcggggaag aagataccca agcttttgac attggcacat
     2161 taaggaatcc agaggcaaga gaagacagta aacttagacg ggatgtaatg cctgaaacta
     2221 tttttcagat aaggaggact gtgcctctgt gggaaaatat tgatgtacaa gattttatcc
     2281 atcgaagatt aaaagaaaac gacgcagacc caagtgcacc tccatatgat tcgctggcaa
     2341 cgtatgccta tgaagggaat gattccatag cagattcgct cagttctttg gaatctctca
     2401 cagctgattg taaccaagat tatgattacc tcagtgactg ggggcctcgt ttcaaaaaac
     2461 ttgccgatat gtatgggggt gatgatagtg accgagacta agaggattgt ttgacttaat
     2521 caatattagt ggaagtactg tctatgttat tagattgagt ggcctgcatt ctcttcctgg
     2581 gaggaaatct ttcaaaaatt gaagttacaa acaatacgta gatgttgtca agtagggatt
     2641 tgcttaatca gtaagtcttt gtgaatgaat acgaatgata cagattttta aaaaagtaat
     2701 aaccagttca ccctctttgc ctaacaatct cgga
//