LOCUS BC113691 1289 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens ataxin 2-binding protein 1, mRNA (cDNA clone
MGC:142251 IMAGE:8322743), complete cds.
ACCESSION BC113691
VERSION BC113691.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1289)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1289)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: n Column: 21.
FEATURES Location/Qualifiers
source 1..1289
/db_xref="H-InvDB:HIT000387144"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142251 IMAGE:8322743"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AGCTTCAG"
gene 1..1289
/gene="A2BP1"
/gene_synonym="FOX1"
/gene_synonym="HRNBP1"
/db_xref="GeneID:54715"
/db_xref="MIM:605104"
CDS 47..1234
/gene="A2BP1"
/gene_synonym="FOX1"
/gene_synonym="HRNBP1"
/codon_start=1
/product="ataxin 2-binding protein 1"
/protein_id="AAI13692.1"
/db_xref="GeneID:54715"
/db_xref="MIM:605104"
/translation="MLASQGVLLHPYGVPMIVPAAPYLPGLIQGNQEAAAAPDTMAQP
YASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSA
QTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQF
GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTN
KKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGF
PYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGY
AAYRYAQPTPATAAAYSDRNQFVFVAADEISCNTSAVTDEFMLPTPTTTHLLQPPPTA
LVP"
BASE COUNT 306 a 392 c 321 g 270 t
ORIGIN
1 cattgatgtg ttgagcttca gagggaataa taactctacg taaagcatgc tggcgtctca
61 aggagttctc ctgcatcctt atggcgtgcc tatgattgta ccggcagctc cttaccttcc
121 tggactgatt cagggtaatc aggaagcagc cgctgcccct gacacaatgg ctcagcctta
181 cgcttcggcc cagtttgctc ccccgcagaa cggtatcccc gcggaataca cggcccctca
241 tccccacccc gcgccagagt acacaggcca gaccacggtt cccgagcaca cattaaacct
301 gtaccctccc gcccagacgc actccgagca gagcccggcg gacacgagcg ctcagaccgt
361 ctctggcacc gccacacaga cagatgacgc agcaccgacg gatggccagc cccagacaca
421 accttctgaa aacacggaaa acaagtctca gcccaagcgg ctgcatgtct ccaatatccc
481 cttcaggttc cgggatccgg acctcagaca aatgtttggt caatttggta aaatcttaga
541 tgttgaaatt atttttaatg agcgaggctc aaagggattt ggtttcgtaa ctttcgaaaa
601 tagtgccgat gcggacaggg cgagggagaa attacacggc accgtggtag agggccgtaa
661 aatcgaggta aataatgcca cagcacgtgt aatgacaaat aaaaagaccg tcaaccctta
721 tacaaatggc tggaaattga atccagttgt gggtgcagtc tacagtcccg aattctatgc
781 aggcacggtc ctgttgtgcc aggccaacca ggagggatct tccatgtaca gtgcccccag
841 ttcacttgta tatacttctg caatgccagg cttcccgtat ccagcagcca ccgccgcggc
901 cgcctaccga ggggcgcacc tgcgaggccg cggtcgcacc gtgtacaaca ccttcagggc
961 cgcggcgccc ccgcccccga tcccggccta cggcggagta gtgtatcaag agcctgtgta
1021 tggcaataaa ttgctgcagg gtggttatgc tgcataccgc tacgcccagc ctacccctgc
1081 cactgccgct gcctacagtg acagaaatca gttcgtcttc gttgcagcag atgaaatttc
1141 ttgtaacacc tctgcagtta cggacgagtt tatgctgccg acccctacca ccacgcactt
1201 gctccagccc ccacctacgg cgttggtgcc atgaatgctt ttgcaccttt gactgatgcc
1261 aagactagga gccatgctga tgatgtggg
//