LOCUS BC113687 2876 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens chloride channel accessory 4, mRNA (cDNA clone
MGC:142247 IMAGE:8322739), complete cds.
ACCESSION BC113687
VERSION BC113687.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2876)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2876)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: n Column: 17.
FEATURES Location/Qualifiers
source 1..2876
/db_xref="H-InvDB:HIT000387140"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142247 IMAGE:8322739"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCCCCACT"
gene 1..2876
/gene="CLCA4"
/gene_synonym="CaCC"
/gene_synonym="CaCC2"
/db_xref="GeneID:22802"
/db_xref="HGNC:HGNC:2018"
CDS 40..2793
/gene="CLCA4"
/gene_synonym="CaCC"
/gene_synonym="CaCC2"
/codon_start=1
/product="chloride channel accessory 4"
/protein_id="AAI13688.1"
/db_xref="GeneID:22802"
/db_xref="HGNC:HGNC:2018"
/translation="MGLFRGFVFLLVLCLLHQSNTSFIKLNNNGFEDIVIVIDPSVPE
DEKIIEQIEDMVTTASTYLFEATEKRFFFKNVSILIPENWKENPQYKRPKHENHKHAD
VIVAPPTLPGRDEPYTKQFTECGEKGEYIHFTPDLLLGKKQNEYGPPGKLFVHEWAHL
RWGVFDEYNEDQPFYRAKSKKIEATRCSAGISGRNRVYKCQGGSCLSRACRIDSTTKL
YGKDCQFFPDKVQTEKASIMFMQSIDSVVEFCNEKTHNQEAPSLQNIKCNFRSTWEVI
SNSEDFKNTIPMVTPPPPPVFSLLKISQRIVCLVLDKSGSMGGKDRLNRMNQAAKHFL
LQTVENGSWVGMVHFDSTATIVNKLIQIKSSDERNTLMAGLPTYPLGGTSICSGIKYA
FQVIGELHSQLDGSEVLLLTDGEDNTASSCIDEVKQSGAIVHFIALGRAADEAVIEMS
KITGGSHFYVSDEAQNNGLIDAFGALTSGNTDLSQKSLQLESKGLTLNSNAWMNDTVI
IDSTVGKDTFFLITWNSLPPSISLWDPSGTIMENFTVDATSKMAYLSIPGTAKVGTWA
YNLQAKANPETLTITVTSRAANSSVPPITVNAKMNKDVNSFPSPMIVYAEILQGYVPV
LGANVTAFIESQNGHTEVLELLDNGAGADSFKNDGVYSRYFTAYTENGRYSLKVRAHG
GANTARLKLRPPLNRAAYIPGWVVNGEIEANPPRPEIDEDTQTTLEDFSRTASGGAFV
VSQVPSLPLPDQYPPSQITDLDATVHEDKIILTWTAPGDNFDVGKVQRYIIRISASIL
DLRDSFDDALQLNTTDLSPKEANSKESFAFKPENISEENATHIFIAIKSIDKSNLTSK
VSNIAQVTLFIPQANPDDIDPTPTPTPTPDKSHNSGVNISTLVLSVIGSVVIVNFILS
TTI"
BASE COUNT 958 a 561 c 588 g 769 t
ORIGIN
1 caaaccaaca tttgagccag gaataactag agaggaacaa tggggttatt cagaggtttt
61 gttttcctct tagttctgtg cctgctgcac cagtcaaata cttccttcat taagctgaat
121 aataatggct ttgaagatat tgtcattgtt atagatccta gtgtgccaga agatgaaaaa
181 ataattgaac aaatagagga tatggtgact acagcttcta cgtacctgtt tgaagccaca
241 gaaaaaagat tttttttcaa aaatgtatct atattaattc ctgagaattg gaaggaaaat
301 cctcagtaca aaaggccaaa acatgaaaac cataaacatg ctgatgttat agttgcacca
361 cctacactcc caggtagaga tgaaccatac accaagcagt tcacagaatg tggagagaaa
421 ggcgaataca ttcacttcac ccctgacctt ctacttggaa aaaaacaaaa tgaatatgga
481 ccaccaggca aactgtttgt ccatgagtgg gctcacctcc ggtggggagt gtttgatgag
541 tacaatgaag atcagccttt ctaccgtgct aagtcaaaaa aaatcgaagc aacaaggtgt
601 tccgcaggta tctctggtag aaatagagtt tataagtgtc aaggaggcag ctgtcttagt
661 agagcatgca gaattgattc tacaacaaaa ctgtatggaa aagattgtca attctttcct
721 gataaagtac aaacagaaaa agcatccata atgtttatgc aaagtattga ttctgttgtt
781 gaattttgta acgaaaaaac ccataatcaa gaagctccaa gcctacaaaa cataaagtgc
841 aattttagaa gtacatggga ggtgattagc aattctgagg attttaaaaa caccataccc
901 atggtgacac cacctcctcc acctgtcttc tcattgctga agatcagtca aagaattgtg
961 tgcttagttc ttgataagtc tggaagcatg gggggtaagg accgcctaaa tcgaatgaat
1021 caagcagcaa aacatttcct gctgcagact gttgaaaatg gatcctgggt ggggatggtt
1081 cactttgata gtactgccac tattgtaaat aagctaatcc aaataaaaag cagtgatgaa
1141 agaaacacac tcatggcagg attacctaca tatcctctgg gaggaacttc catctgctct
1201 ggaattaaat atgcatttca ggtgattgga gagctacatt cccaactcga tggatccgaa
1261 gtactgctgc tgactgatgg ggaggataac actgcaagtt cttgtattga tgaagtgaaa
1321 caaagtgggg ccattgttca ttttattgct ttgggaagag ctgctgatga agcagtaata
1381 gagatgagca agataacagg aggaagtcat ttttatgttt cagatgaagc tcagaacaat
1441 ggcctcattg atgcttttgg ggctcttaca tcaggaaata ctgatctctc ccagaagtcc
1501 cttcagctcg aaagtaaggg attaacactg aatagtaatg cctggatgaa cgacactgtc
1561 ataattgata gtacagtggg aaaggacacg ttctttctca tcacatggaa cagtctgcct
1621 cccagtattt ctctctggga tcccagtgga acaataatgg aaaatttcac agtggatgca
1681 acttccaaaa tggcctatct cagtattcca ggaactgcaa aggtgggcac ttgggcatac
1741 aatcttcaag ccaaagcgaa cccagaaaca ttaactatta cagtaacttc tcgagcagca
1801 aattcttctg tgcctccaat cacagtgaat gctaaaatga ataaggacgt aaacagtttc
1861 cccagcccaa tgattgttta cgcagaaatt ctacaaggat atgtacctgt tcttggagcc
1921 aatgtgactg ctttcattga atcacagaat ggacatacag aagttttgga acttttggat
1981 aatggtgcag gcgctgattc tttcaagaat gatggagtct actccaggta ttttacagca
2041 tatacagaaa atggcagata tagcttaaaa gttcgggctc atggaggagc aaacactgcc
2101 aggctaaaat tacggcctcc actgaataga gccgcgtaca taccaggctg ggtagtgaac
2161 ggggaaattg aagcaaaccc gccaagacct gaaattgatg aggatactca gaccaccttg
2221 gaggatttca gccgaacagc atccggaggt gcatttgtgg tatcacaagt cccaagcctt
2281 cccttgcctg accaataccc accaagtcaa atcacagacc ttgatgccac agttcatgag
2341 gataagatta ttcttacatg gacagcacca ggagataatt ttgatgttgg aaaagttcaa
2401 cgttatatca taagaataag tgcaagtatt cttgatctaa gagacagttt tgatgatgct
2461 cttcaactaa atactactga tctgtcacca aaggaggcca actccaagga aagctttgca
2521 tttaaaccag aaaatatctc agaagaaaat gcaacccaca tatttattgc cattaaaagt
2581 atagataaaa gcaatttgac atcaaaagta tccaacattg cacaagtaac tttgtttatc
2641 cctcaagcaa atcctgatga cattgatcct acacctactc ctactcctac tcctgataaa
2701 agtcataatt ctggagttaa tatttctacg ctggtattgt ctgtgattgg gtctgttgta
2761 attgttaact ttattttaag taccaccatt tgaaccttaa cgaagaaaaa aatcttcaag
2821 tagacctaga agagagtttt aaaaaacaaa acaatgtaag taaaggatat ttctga
//