LOCUS BC113686 1616 bp mRNA linear HUM 28-JUL-2006
DEFINITION Homo sapiens keratin 72, mRNA (cDNA clone MGC:142246
IMAGE:8322738), complete cds.
ACCESSION BC113686
VERSION BC113686.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1616)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1616)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: n Column: 16.
FEATURES Location/Qualifiers
source 1..1616
/db_xref="H-InvDB:HIT000387139"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142246 IMAGE:8322738"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AAGTTGAG"
gene 1..1616
/gene="KRT72"
/gene_synonym="K6irs"
/gene_synonym="K6IRS2"
/gene_synonym="KRT6"
/gene_synonym="KRT6IRS2"
/db_xref="GeneID:140807"
/db_xref="HGNC:HGNC:28932"
/db_xref="MIM:608246"
CDS 21..1556
/gene="KRT72"
/gene_synonym="K6irs"
/gene_synonym="K6IRS2"
/gene_synonym="KRT6"
/gene_synonym="KRT6IRS2"
/codon_start=1
/product="keratin 72"
/protein_id="AAI13687.1"
/db_xref="GeneID:140807"
/db_xref="HGNC:HGNC:28932"
/db_xref="MIM:608246"
/translation="MSRQLTHFPRGERLGFSGCSAVLSGGIGSSSASFRARVKGSASF
GSKSLSCLGGSRSLALSAAARRGGGRLGGFVGTAFGSAGLGPKCPSVCPPGGIPQVTV
NKSLLAPLNVEMDPEIQRVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLETKWNLL
QQLDLNNCRKNLEPIYEGYISNLQKQLEMLSGDGVRLDSELRNMQDLVEDYKKRYEVE
INRRTAAENEFVVLKKDVDAAYMNKVELQAKVDSLTDEIKFFKCLYEGEITQIQSHIS
DTSIVLSMDNNRDLDLDSIIAEVRAQYEEIALKSKAEAETLYQTKIQELQVTAGQHGD
DLKLTKAEISELNRLIQRIRSEIGNVKKQCAELETAIADAEQRGDCALKDARAKLDEL
EGALHQAKEELARMLREYQELVSLKLALDMEIATYRKLLESEECRMSGEYPNSVSISV
ISSTNAGAGGAGFSMGFGASSSYSYKTAAADVKTKGSCGSELKDPLAKTSGSSCATKK
ASR"
BASE COUNT 368 a 457 c 513 g 278 t
ORIGIN
1 agcaccggta cttgcgagcc atgagccgcc aactgaccca tttcccccgc ggggagcgcc
61 tgggcttcag cggttgctcc gcggtcctct ctggcgggat cggcagcagc tccgcctcat
121 tccgggcccg ggtcaagggc tcggcctcct ttggcagcaa gagcctctcc tgccttgggg
181 gcagccgaag cctggcgctc agcgctgctg cacggcgggg cggcggccgc ctgggcggct
241 tcgtgggcac cgccttcggc agcgccgggc tggggcccaa gtgtccctcc gtgtgcccac
301 ccgggggcat ccctcaggtc accgtcaaca agagcctcct ggccccgctc aacgtggaga
361 tggaccccga gatccagagg gtgcgcgccc aggagcggga gcagatcaag gcgctaaaca
421 acaagttcgc ctccttcatc gacaaggtgc ggttcctgga gcagcagaat caggtgctag
481 agaccaagtg gaacctccta cagcagctgg acttgaacaa ctgcaggaag aacctggagc
541 ccatttatga gggctacatc agcaacctgc agaagcagct ggagatgctg tctggggacg
601 gggtgaggct ggattcggag ctgaggaaca tgcaggattt ggtggaggac tacaagaaga
661 ggtatgaggt ggagattaac agacgcacag ctgctgagaa tgagtttgtg gtgctcaaga
721 aggacgtgga tgctgcttac atgaataagg ttgagctcca ggccaaggtg gactccttga
781 cagatgagat taaattcttc aagtgccttt atgaagggga gatcactcag atccagtccc
841 acatcagcga cacgtccatc gtcctgtcaa tggacaacaa ccgggatctg gacctggaca
901 gcatcattgc cgaggtccgt gcccagtacg aggagattgc cctaaagagc aaggccgagg
961 ctgagaccct gtaccagacc aagatccagg agctgcaggt cacagcaggc cagcatgggg
1021 atgacctcaa gctcaccaag gctgaaatct ctgagctcaa ccgcctgatc cagaggatcc
1081 gctcagagat agggaatgtg aagaagcagt gtgccgaact ggagacggcc atcgccgacg
1141 ctgaacagcg gggggactgc gccctgaaag atgcccgggc caagctggat gagctggagg
1201 gcgccctgca ccaggccaag gaggagctgg cacggatgct gcgtgagtac caggagctcg
1261 tgagcctgaa gctggccctg gatatggaga tcgccaccta ccgcaagctg ctggagagcg
1321 aggagtgcag gatgtctggc gaatatccaa attctgtgag catctccgtc atcagcagca
1381 ccaatgctgg ggcaggaggg gctggcttca gcatgggctt tggcgcctca agcagttata
1441 gctacaaaac tgcagctgca gacgtcaaga ccaaaggcag ctgtggcagt gagctcaagg
1501 atccccttgc caaaacctcg gggagcagct gtgccaccaa aaaggcctcc agatgatgga
1561 caagtggttg gctctgtgag cagaaggctt cccaactcac ccgtctcctc cctctc
//