LOCUS BC113680 1043 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens programmed cell death 1 ligand 2, mRNA (cDNA clone
MGC:142240 IMAGE:8322732), complete cds.
ACCESSION BC113680
VERSION BC113680.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1043)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1043)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: n Column: 10.
FEATURES Location/Qualifiers
source 1..1043
/db_xref="H-InvDB:HIT000387133"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142240 IMAGE:8322732"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_299"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCCTACTA"
gene 1..1043
/gene="PDCD1LG2"
/gene_synonym="B7DC"
/gene_synonym="bA574F11.2"
/gene_synonym="Btdc"
/gene_synonym="CD273"
/gene_synonym="PD-L2"
/gene_synonym="PDCD1L2"
/gene_synonym="PDL2"
/db_xref="GeneID:80380"
/db_xref="HGNC:HGNC:18731"
/db_xref="MIM:605723"
CDS 37..858
/gene="PDCD1LG2"
/gene_synonym="B7DC"
/gene_synonym="bA574F11.2"
/gene_synonym="Btdc"
/gene_synonym="CD273"
/gene_synonym="PD-L2"
/gene_synonym="PDCD1L2"
/gene_synonym="PDL2"
/codon_start=1
/product="programmed cell death 1 ligand 2"
/protein_id="AAI13681.1"
/db_xref="GeneID:80380"
/db_xref="HGNC:HGNC:18731"
/db_xref="MIM:605723"
/translation="MIFLLLMLSLELQLHQIAALFTVTVPKELYIIEHGSNVTLECNF
DTGSHVNLGAITASLQKVENDTSPHRERATLLEEQLPLGKASFHIPQVQVRDEGQYQC
IIIYGVAWDYKYLTLKVKASYRKINTHILKVPETDEVELTCQATGYPLAEVSWPNVSV
PANTSHSRTPEGLYQVTSVLRLKPPPGRNFSCVFWNTHVRELTLASIDLQSQMEPRTH
PTWLLHIFIPSCIIAFIFIATVIALRKQLCQKLYSSKDTTKRPVTTTKREVNSAI"
BASE COUNT 305 a 278 c 224 g 236 t
ORIGIN
1 tggagctgtg gcaagtcctc atatcaaata cagaacatga tcttcctcct gctaatgttg
61 agcctggaat tgcagcttca ccagatagca gctttattca cagtgacagt ccctaaggaa
121 ctgtacataa tagagcatgg cagcaatgtg accctggaat gcaactttga cactggaagt
181 catgtgaacc ttggagcaat aacagccagt ttgcaaaagg tggaaaatga tacatcccca
241 caccgtgaaa gagccacttt gctggaggag cagctgcccc tagggaaggc ctcgttccac
301 atacctcaag tccaagtgag ggacgaagga cagtaccaat gcataatcat ctatggggtc
361 gcctgggact acaagtacct gactctgaaa gtcaaagctt cctacaggaa aataaacact
421 cacatcctaa aggttccaga aacagatgag gtagagctca cctgccaggc tacaggttat
481 cctctggcag aagtatcctg gccaaacgtc agcgttcctg ccaacaccag ccactccagg
541 acccctgaag gcctctacca ggtcaccagt gttctgcgcc taaagccacc ccctggcaga
601 aacttcagct gtgtgttctg gaatactcac gtgagggaac ttactttggc cagcattgac
661 cttcaaagtc agatggaacc caggacccat ccaacttggc tgcttcacat tttcatcccc
721 tcctgcatca ttgctttcat tttcatagcc acagtgatag ccctaagaaa acaactctgt
781 caaaagctgt attcttcaaa agacacaaca aaaagacctg tcaccacaac aaagagggaa
841 gtgaacagtg ctatctgaac ctgtggtctt gggagccagg gtgacctgat atgacatcta
901 aagaagcttc tggactctga acaagaattc ggtggcctgc agagcttgtc atttgcactt
961 ttcaaatgcc tttggatgac ccagcacttt aatctgaaac ctgcaacaag actagccaac
1021 acctggccat gaaacttgcc cct
//