LOCUS BC113656 4651 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens ATPase family, AAA domain containing 2, mRNA (cDNA
clone MGC:142216 IMAGE:8322708), complete cds.
ACCESSION BC113656
VERSION BC113656.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4651)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4651)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: m Column: 10.
FEATURES Location/Qualifiers
source 1..4651
/db_xref="H-InvDB:HIT000387109"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142216 IMAGE:8322708"
/tissue_type="Cerebellum, Lung, PCR rescued clones"
/clone_lib="NIH_MGC_348"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: AGCCTGTT"
gene 1..4651
/gene="ATAD2"
/gene_synonym="DKFZp667N1320"
/gene_synonym="MGC29843"
/gene_synonym="MGC5254"
/gene_synonym="PRO2000"
/db_xref="GeneID:29028"
/db_xref="HGNC:HGNC:30123"
CDS 23..4195
/gene="ATAD2"
/gene_synonym="DKFZp667N1320"
/gene_synonym="MGC29843"
/gene_synonym="MGC5254"
/gene_synonym="PRO2000"
/codon_start=1
/product="ATPase family, AAA domain containing 2"
/protein_id="AAI13657.1"
/db_xref="GeneID:29028"
/db_xref="HGNC:HGNC:30123"
/translation="MVVLRSSLELHNHSAASATGSLDLSSDFLSLEHIGRRRLRSAGA
AQKKPAATTAKAGDGSSVKEVETYHRTRALRSLRKDAQNSSDSSFEKNVEITEQLANG
RHFTRQLARQQADKKKEEHREDKVIPVTRSLRARNIVQSTEHLHEDNGDVEVRRSCRI
RSRYSGVNQSMLFDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNETEESNLNM
YTRGKQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDD
DEDDEDEEDGEEENQKRYYLRQRKATVYYQAPLEKPRHQRKPNIFYSGPASPARPRYR
LSSAGPRSPYCKRMNRRRHAIHSSDSTSSSSSEDEQHFERRRKRSRNRAINRCLPLNF
RKDELKGIYKDRMKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPE
VFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGE
SERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRG
EIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFL
EELAENCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVA
MQKMIPASQRAVTSPGQALSTVVKPLLQNTVDKILEALQRVFPHAEFRTNKTLDSDIS
CPLLESDLAYSDDDVPSVYENGLSQKSSHKAKDNFNFLHLNRNACYQPMSFRPRILIV
GEPGFGQGSHLAPAVIHALEKFTVYTLDIPVLFGVSTTSPEETCAQVIREAKRTAPSI
VYVPHIHVWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSALPEEVQELFIRD
YGEIFNVQLPDKEERTKFFEDLILKQAAKPPISKKKAVLQALEVLPVAPPPEPRSLTA
EEVKRLEEQEEDTFRELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMD
LSSVISKIDLHKYLTVKDYLRDIDLICSNALEYNPDRDPGDRLIRHRACALRDTAYAI
IKEELDEDFEQLCEEIQESRKKRGCSSSKYAPSYYHVMPKQNSTLVGDKRSDPEQNEK
LKTPSTPVACSTPAQLKRKIRKKSNWYLGTIKKRRKISQAKDDSQNAIDHKIESDTEE
TQDTSVDHNETGNTGESSVEENEKQQNASESKLELRNNSNTCNIENELEDSRKTTACT
ELRDKIACNGDASSSQIIHISDENEGKEMCVLRMTRARRSQVEQQQLITVEKALAILS
QPTPSLVVDHERLKNLLKTVVKKSQNYNIFQLENLYAVISQCIYRHRKDHDKTSLIQK
MEQEVENFSCSR"
BASE COUNT 1535 a 853 c 1018 g 1245 t
ORIGIN
1 ccgaggccag tagggagaga agatggtggt tctccgcagc agcttggagc tgcacaacca
61 ctccgcggcc tcggccacgg gctccttgga cctgtccagt gacttcctca gtctggagca
121 catcggccgg aggcggctcc gctcggccgg cgcggcgcag aagaaacccg cggcgaccac
181 agccaaagcg ggcgatgggt catcagttaa ggaagttgaa acctaccacc ggacacgtgc
241 tttaagatct ttgagaaaag atgcacagaa ttcttcagat tctagttttg agaagaatgt
301 ggaaataacg gagcaacttg ctaatggcag gcattttaca aggcagttgg ccagacagca
361 ggctgataaa aaaaaagaag agcacagaga agacaaagtg attccagtta ctcggtcatt
421 gagggctaga aacatcgttc aaagtacaga acacttacat gaagataatg gtgatgttga
481 agtgcgtcga agttgtagga ttagaagtcg ttatagtggt gtaaaccagt ccatgctgtt
541 tgacaaactt ataactaaca ctgctgaagc tgtacttcaa aaaatggatg acatgaagaa
601 gatgcgtaga cagcgaatga gagaacttga agacttggga gtgtttaatg aaacagaaga
661 aagcaatctt aatatgtaca caagaggaaa acagaaagat attcaaagaa ctgatgaaga
721 aacaactgat aatcaagaag gcagtgtgga gtcatctgaa gagggtgaag accaagaaca
781 tgaagatgat ggtgaagatg aagatgatga agatgatgat gatgatgacg atgatgatga
841 tgatgatgat gatgaagatg atgaagatga agaagatgga gaagaagaga atcagaagcg
901 atattatctt agacagagaa aagctactgt ttactatcag gctccattgg aaaaacctcg
961 tcaccagaga aagcccaaca tattttatag tggcccagct tctcctgcaa gaccaagata
1021 ccgattatct tccgcaggac caagaagtcc ttactgtaaa cgaatgaaca ggcgaaggca
1081 tgcaatccac agtagtgact cgacttcatc ttcctcctct gaagatgaac agcactttga
1141 gaggcggagg aaaaggagtc gtaatagggc tatcaatagg tgcctcccac taaattttcg
1201 gaaagatgaa ttaaaaggca tttataaaga tcgaatgaaa attggagcaa gccttgccga
1261 tgttgatcca atgcaactag attcttcagt acgatttgat agtgttggtg gcctgtctaa
1321 tcatatagca gctctaaaag agatggtggt gtttccatta ctttatccag aagtctttga
1381 aaaatttaaa attcaacccc caagaggttg tttgttttat gggccacctg gaactggaaa
1441 gactctggtt gccagagcac ttgccaatga gtgcagtcaa ggggataaaa gagtagcatt
1501 tttcatgagg aaaggtgctg attgtctaag taaatgggta ggagaatctg aaagacagct
1561 acgattgctg tttgatcagg cctatcagat gcgcccatca attatttttt ttgacgaaat
1621 tgatggtctg gctccagtac ggtcaagcag gcaagatcag attcacagtt ctattgtttc
1681 caccctgcta gctcttatgg atggattgga cagcagaggg gaaattgtgg tcattggtgc
1741 tacgaacagg ctagattcta tagatcctgc tttacgaagg cctggtcgct ttgatagaga
1801 attcctcttt agcctgcctg ataaagaggc tcgaaaagag attctaaaga ttcacaccag
1861 ggattggaat cccaaaccac tggacacatt tttagaagag ctagcagaaa actgtgttgg
1921 atactgtgga gcagatatta aatcaatatg tgctgaagct gctttatgtg ctttacgacg
1981 acgctaccca cagatctata ccactagtga gaaactgcag ttggatctct cttcaattaa
2041 tatctcagct aaggatttcg aggtagctat gcaaaagatg ataccagcct cccaaagagc
2101 tgtgacatca cctgggcagg cactgtccac cgttgtgaaa ccactcctgc aaaacactgt
2161 tgacaagatt ttagaagccc tgcagagagt atttccacat gcagaattca gaacaaataa
2221 aacattagac tcagatattt cttgtcctct gctagaaagt gacttggctt acagtgatga
2281 tgatgttcca tcagtttatg aaaatggact ttctcagaaa tcttctcata aggcaaaaga
2341 caattttaat tttcttcatt tgaatagaaa tgcttgttac caacctatgt cttttcgacc
2401 aagaatattg atagtaggag aaccaggatt tgggcaaggt tctcacttgg caccagctgt
2461 cattcatgct ttggaaaagt ttactgtata tacattagac attcctgttc tttttggagt
2521 tagtactaca tcccctgaag aaacatgtgc ccaggtgatt cgtgaagcta agagaacagc
2581 accaagtata gtgtatgttc ctcatatcca cgtgtggtgg gaaatagttg gaccgacact
2641 taaagccaca tttaccacat tattacagaa tattccttca tttgctccag ttttactact
2701 tgcaacttct gacaaacccc attccgcttt gccagaagag gtgcaagaat tgtttatccg
2761 tgattatgga gagattttta atgtccagtt accggataaa gaagaacgga caaaattttt
2821 tgaagattta attctaaaac aagctgctaa gcctcctata tcaaaaaaga aagcagtttt
2881 gcaggctttg gaggtactcc cagtagcacc accacctgag ccaagatcac tgacagcaga
2941 agaagtgaaa cgactagaag aacaagaaga agatacattt agagaactga ggattttctt
3001 aagaaatgtt acacataggc ttgctattga caagcgattc cgagtgttta ctaagcctgt
3061 tgaccctgat gaggttcctg attatgtcac tgtaataaag caaccaatgg acctttcatc
3121 tgtaatcagt aaaattgatc tacacaagta tctgactgtg aaagactatt tgagagatat
3181 tgatctaatc tgtagtaatg ccttagaata caatccagat agagatcctg gagatcgtct
3241 tattaggcat agagcctgtg ctttaagaga tactgcctat gccataatta aagaagaact
3301 tgatgaagac tttgagcagc tctgtgaaga aattcaggaa tctagaaaga aaagaggttg
3361 tagctcctcc aaatatgccc cgtcttacta ccatgtgatg ccaaagcaaa attccactct
3421 tgttggtgat aaaagatcag acccagagca gaatgaaaag ctaaagacac cgagtactcc
3481 tgtggcttgc agcactcctg ctcagttgaa gaggaaaatt cgcaaaaagt caaactggta
3541 cttaggcacc ataaaaaagc gaaggaagat ttcacaggca aaggatgata gccagaatgc
3601 catagatcac aaaattgaga gtgatacaga ggaaactcaa gacacaagtg tagatcataa
3661 tgagaccgga aacacaggag agtcttcggt ggaagaaaat gaaaaacagc aaaatgcctc
3721 tgaaagcaaa ctggaattga gaaataattc aaatacttgt aatatagaga atgagcttga
3781 agactctagg aagactacag catgtacaga attgagagac aagattgctt gtaatggaga
3841 tgcttctagc tctcagataa tacatatttc tgatgaaaat gaaggaaaag aaatgtgtgt
3901 tctgcgaatg actcgagcta gacgttccca ggtagaacag cagcagctca tcactgttga
3961 aaaggctttg gcaattcttt ctcagcctac accctcactt gttgtggatc atgagcgatt
4021 aaaaaatctt ttgaagactg ttgttaaaaa aagtcaaaac tacaacatat ttcagttgga
4081 aaatttgtat gcagtaatca gccaatgtat ttatcggcat cgcaaggacc atgataaaac
4141 atcacttatt cagaaaatgg agcaagaggt agaaaacttc agttgttcca gatgatgatg
4201 tcatggtatc gagtattctt tatattcagt tcctatttaa gtcatttttg tcatgtccgc
4261 ctaattgatg tagtatgaaa ccctgcatct ttaaggaaaa gattaaaata gtaaaataaa
4321 agtatttaaa ctttcctgat atttatgtac atattaagat aaatgtcatg tgtaagataa
4381 ctgataaata ttggaacttt gctagaacaa gaccctgtag taatagtaat aatagttgaa
4441 gtttggccaa ctcttaataa agttattttg gtaactaatg ttttatggca cttaagaata
4501 attagcagcg ttaaattttg tttgtattaa gcacttttaa ttttatcctt cctaaaaata
4561 gtttattgta tctgacaaga aacttactta accattgtgt ccttcccatc ttttttgtca
4621 tctttgtttt cttcaaatgc cctcctccca t
//