LOCUS BC113654 5225 bp mRNA linear HUM 12-OCT-2006 DEFINITION Homo sapiens collagen, type XXIV, alpha 1, mRNA (cDNA clone MGC:142214 IMAGE:8322706), complete cds. ACCESSION BC113654 VERSION BC113654.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5225) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5225) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 5 Row: m Column: 8. FEATURES Location/Qualifiers source 1..5225 /db_xref="H-InvDB:HIT000387107" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:142214 IMAGE:8322706" /tissue_type="Cerebellum, Lung, PCR rescued clones" /clone_lib="NIH_MGC_348" /lab_host="DH10B" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: TGGGGATG" gene 1..5225 /gene="COL24A1" /db_xref="GeneID:255631" /db_xref="HGNC:HGNC:20821" /db_xref="MIM:610025" CDS 40..5184 /gene="COL24A1" /codon_start=1 /product="collagen, type XXIV, alpha 1" /protein_id="AAI13655.1" /db_xref="GeneID:255631" /db_xref="HGNC:HGNC:20821" /db_xref="MIM:610025" /translation="MHLRAHRTRRGKVSPTAKTKSLLHFIVLCVAGVVVHAQEQGIDI LHQLGLGGKDVRHSSPVTAVPSASTPLPQGVHLTESGVIFKNDAYIETPFVKILPVNL GQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLPKKLVVHIRGKQPAVFNYSVHD EQWHSFAITIRNQSVSMFVECGKKYFSTETIPEVQTFDSNSVFTLGSMNNNSIHFEGI VCQLDIIPSAEASADYCRYVKQQCRQADKYQPETSIPCTTLIPTKIPEHSPPPKLFAE KVLSEDTFTEGKSIPNIIKNDSETVYKRQEHQISRSQLSSLQSGNVSAVDLTNHGIQA KEMITEEDTQTNFSLSVTTHRISEAKMNTKEKFSSLLNMSDNITQHDDRVTGLSLFKK MPSILPQIKQDTITNLKKAITANLHTNELMEMQPILNTSLHRVTNEPSVDNHLDLRKE GEFYPDATYPIENSYETELYDYYYYEDLNTMLEMEYLRGPKGDTGPPGPPGPAGIPGP SGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQ GDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPG EAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGL RGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLP GPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPG PPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGP VGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGAR GPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQG KPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGD VGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGII GPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKG ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPG PRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGS EGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIR GGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQG PCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGR EGIIGPTGRTGPRGEKGFRGETGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIES NTALQMESYQNTEVTLIDHSEEIFKTLNYLSNLLHSIKNPLGTRDNPARICKDLLNCE QKVSDGKYWIDPNLGCPSDAIEVFCNFSAGGQTCLPPVSVTKLEFGVGKVQMNFLHLL SSEATHIITIHCLNTPRWTSTQTSGPGLPIGFKGWNGQIFKVNTLLEPKVLSDDCKIQ DGSWHKATFLFHTQEPNQLPVIEVQKLPHLKTERKYYIDSSSVCFL" BASE COUNT 1610 a 1081 c 1402 g 1132 t ORIGIN 1 tttccgttag cgctttgctg cacggacaaa tgcatacaaa tgcatttaag agcccacaga 61 acaaggcgtg gaaaagtctc ccccacggca aaaacgaaat cacttcttca ttttattgta 121 ctatgtgtgg ctggggtggt tgttcatgca caagaacaag gcatagatat tcttcatcaa 181 ctaggccttg gaggcaaaga cgtaagacac tcatcaccag tgactgctgt accatcagca 241 tctacaccgt tacctcaggg ggtccattta acagaatcag gagtcatttt taaaaatgat 301 gcttatatcg agacaccttt cgtgaaaatt ttaccagtca acttggggca gccgtttaca 361 atattaactg ggttacagtc acatcgggtg aacaatgcat ttctcttcag cattagaaat 421 aaaaatagac tgcaattagg agtacaatta ctacctaaaa aattagtagt acacattaga 481 ggaaagcagc ctgcagtttt caactacagt gttcatgatg agcaatggca ctcatttgcc 541 attactatta gaaaccaaag tgtctcaatg tttgttgagt gtggaaagaa atattttagc 601 acagagacta ttccagaagt tcagaccttt gattctaata gtgtgtttac tttaggaagt 661 atgaataata attctatcca ttttgaagga atagtatgtc agttagatat tattccttct 721 gcagaagcat ctgcagacta ctgcagatat gtgaaacagc agtgtcgcca agcagacaaa 781 taccaacctg aaacaagcat tccttgtaca actctcatac caacaaagat accggaacac 841 tctcccccgc ccaaactatt tgctgaaaaa gtactgtcag aggatacatt tactgaaggc 901 aaaagcattc caaatatcat aaaaaatgat tctgaaaccg tgtataaaag acaagaacac 961 cagatatcaa gatctcagtt atcttctctt cagtcaggaa atgtctctgc tgtggatctc 1021 acaaaccatg ggattcaggc caaagaaatg atcactgagg aagatactca gacaaatttc 1081 agcctgtcag tgaccactca tcgcatcagt gaggcaaaaa tgaataccaa agagaaattt 1141 agttctctcc taaacatgtc tgacaatatc acacaacatg atgatagagt aactggtctg 1201 tcactgttta agaagatgcc atctattctt ccacaaatta aacaagatac aattactaat 1261 ctcaagaagg ctatcacagc aaatctacac actaacgaac tcatggaaat gcaaccaatt 1321 ttaaacacaa gcttgcatag agtgacaaat gagccatctg tggataatca ccttgatcta 1381 aggaaagaag gtgaatttta tcctgatgct acttatccca tcgaaaatag ctatgaaact 1441 gagctttatg attattatta ttatgaggat ctaaatacaa tgcttgaaat ggagtatctg 1501 agagggccaa aaggagacac tggacctccc ggtccacctg gtccagcagg tatcccaggt 1561 ccgtcaggga agagaggtcc acggggcata ccagggccac atggaaatcc tggtttacct 1621 ggattacctg gtccaaaggg ccccaaagga gatccaggat tttccccagg tcaacctgtt 1681 cctggagaaa agggtgatca aggcctttct ggattaatgg gcccccctgg tatgcaaggt 1741 gataagggtc tcaaaggaca tcctggactc ccaggacttc caggtgaaca aggaattcca 1801 ggatttgctg gtaatattgg ttcacccggt taccctggca ggcagggttt agctggacca 1861 gaaggtaatc caggtcctaa aggtgcacaa ggttttattg gctctcctgg agaagcggga 1921 caactgggac ctgaaggaga acggggcatt cctgggatcc gtggaaagaa gggttttaag 1981 gggagacagg gttttccagg tgactttgga gacagaggcc ctgctggtct tgatggcagt 2041 cctggacttg taggtggcac tggtcctccg gggtttcctg ggcttagagg cagtgttggc 2101 cctgtgggac caattggacc tgctggaatt cctggcccaa tgggcctttc agggaataaa 2161 ggactacctg gaatcaaagg tgataagggt gaacaaggca cagcaggaga gctaggagaa 2221 cccgggtatc ctggagacaa gggtgctgtt ggtttaccag gaccaccagg gatgagagga 2281 aagtcagggc cttcaggcca aacaggtgac ccaggactcc aaggaccatc tggccctcca 2341 ggaccagagg gttttccagg agatattggg attcctggac aaaacggccc tgaaggacca 2401 aagggactcc ttggaaatag aggacctcct ggacctcctg gtctcaaagg aactcaggga 2461 gaagaaggac caattggagc ctttggggaa ctggggccaa gaggaaaacc aggtcaaaag 2521 gggtatgcag gtgaaccagg accagaaggc ttaaagggag aagtaggaga tcaaggaaat 2581 attggaaaaa ttggtgaaac aggacctgtt ggcttacctg gagaagttgg gatgactgga 2641 agcattggcg aaaagggaga acgtggaagt ccaggcccac taggtccgca gggagaaaaa 2701 ggtgttatgg gatatccagg tcctcctggg gttccaggac ctatcggtcc attgggatta 2761 cctggtcatg tgggggcaag aggaccacct gggagtcaag gtcctaaagg acaaagagga 2821 tcaagaggac cagatggtct cttaggggaa caaggtatac aaggtgccaa gggtgaaaaa 2881 ggagatcaag gaaaaagagg gcctcatggt cttattggta agactggaaa ccctggagaa 2941 agaggatttc aagggaaacc aggtttacag ggattgcctg gaagtacagg tgacagagga 3001 cttccaggag agccaggact gcgaggactg caaggtgatg ttggacctcc tggagaaatg 3061 ggcatggagg gacctccagg cactgaggga gagtctggtc tgcaaggtga accaggtgca 3121 aagggagatg ttggaactgc tggcagtgtt ggaggaactg gggaaccagg tttacggggt 3181 gaaccaggag ctcctggaga agaaggtctc cagggaaaag atgggttaaa gggagtacca 3241 ggaggaaggg gacttcctgg agaggatgga gaaaaaggag agatgggctt accaggaatt 3301 ataggaccct tgggtagatc aggccaaaca ggccttccgg gacctgaagg aattgtggga 3361 attccagggc aaagaggtcg tccaggaaaa aagggtgata aaggacaaat aggacccaca 3421 ggagaagttg gaagcagagg tcctcctgga aaaattggga aaagtggtcc taagggtgcc 3481 agaggaacta gaggtgctgt gggacattta ggattgatgg gacctgatgg agaaccagga 3541 attccagggt acaggggcca tcagggccaa ccaggaccct ctggattgcc aggacctaaa 3601 ggagaaaagg gctacccagg agaagatagc acagtcctag gaccacctgg gcctcgaggt 3661 gaaccaggtc cagtggggga ccaaggagag agaggagagc ctggagcaga gggatataag 3721 ggccatgtgg gtgtaccagg actaagaggt gccactggac aacaaggacc cccaggcgaa 3781 ccaggtgacc agggtgaaca aggactaaaa ggagagagag gatctgaagg taataagggg 3841 aaaaaaggag ctcctggtcc ttctgggaaa cctgggattc ctggacttca aggcctactt 3901 gggccaaaag gcatacaagg ataccatgga gcagatggca tttcaggaaa ccctggaaaa 3961 attgggccac caggaaaaca gggacttcct ggcatcagag gcggcccagg aagaacaggt 4021 cttgctgggg ctccaggtcc tccaggagta aagggttcat caggcttgcc aggaagccca 4081 ggaattcaag gcccaaaggg tgaacaaggg ctacctggtc aacctggaat tcaaggtaaa 4141 agaggtcacc gaggagcaca aggtgatcaa ggaccatgtg gagaccctgg cctgaaaggg 4201 cagcctggag aatatggtgt tcaaggtttg acaggtttcc aaggattccc aggccctaaa 4261 ggtcctgaag gggatgctgg cattgttggg atatcaggtc ctaaaggtcc tattggacac 4321 agaggaaaca ctggtcccct tggcagagaa ggtataatag gcccaacagg tagaactgga 4381 cccagaggtg aaaagggctt tagaggtgaa actggtcctc aaggaccaag aggtcaacca 4441 gggcctccag gtccacctgg agcaccaggc ccaagaaagc aaatggatat caatgctgct 4501 attcaagcct tgattgaatc aaatactgcc ctacagatgg agagctacca gaatactgaa 4561 gtgactttaa ttgaccacag tgaagagata ttcaaaaccc tgaactacct tagcaattta 4621 ttgcacagca tcaagaatcc tcttggcaca cgagataacc cagcacgaat ctgcaaagat 4681 ttacttaact gtgaacaaaa agtatcagat ggaaaatact ggattgaccc aaatcttggc 4741 tgtccttcag atgccattga ggttttctgc aatttcagtg ctggtggcca gacatgctta 4801 cctcctgttt ctgtaacaaa gttggagttt ggagttggga aagtccagat gaacttcctt 4861 catttactga gttcggaagc cacccatatc atcaccattc actgtctaaa caccccaagg 4921 tggacaagca cacaaacaag tggcccagga ttgcctattg gtttcaaggg atggaatggc 4981 cagattttta aagtaaacac tctacttgaa cctaaagtgc tttcagatga ctgcaagatt 5041 caagatggca gctggcataa ggcaacattt ctttttcaca cccaggaacc taatcaactt 5101 ccagtgattg aagtacaaaa acttcctcat ctcaaaactg aacgaaagta ttacattgac 5161 agcagttctg tatgctttct gtaaagtctc tgaattagtt ccgaattcag gctgttggcc 5221 aggta //