LOCUS BC113559 1181 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens transmembrane protein 30B, mRNA (cDNA clone MGC:142119
IMAGE:8322611), complete cds.
ACCESSION BC113559
VERSION BC113559.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1181)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: i Column: 9.
FEATURES Location/Qualifiers
source 1..1181
/db_xref="H-InvDB:HIT000387012"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142119 IMAGE:8322611"
/tissue_type="Lung and heart, PCR rescued clones"
/clone_lib="NIH_MGC_314"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AGAAACTA"
gene 1..1181
/gene="TMEM30B"
/gene_synonym="CDC50B"
/db_xref="GeneID:161291"
/db_xref="HGNC:HGNC:27254"
CDS 47..1102
/gene="TMEM30B"
/gene_synonym="CDC50B"
/codon_start=1
/product="transmembrane protein 30B"
/protein_id="AAI13560.1"
/db_xref="GeneID:161291"
/db_xref="HGNC:HGNC:27254"
/translation="MTWSATARGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGL
AFIGLGLGLYYSSNGIKELEYDYTGDPGTGNCSVCAAAGQGRALPPPCSCAWYFSLPE
LFQGPVYLYYELTNFYQNNRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIA
PCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLAL
AFQGTAPPPNWRRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSA
GLPRGAYRVNITYNYPVRAFGGHKLLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFV
MLVVYIRYQDQDDDDEE"
BASE COUNT 175 a 473 c 332 g 201 t
ORIGIN
1 gggcccccac tcggtcagcc cgcgcgtcgg tccccgcgcg gccgccatga cctggagcgc
61 cacggcccgg ggcgcccacc agcccgacaa caccgccttc actcagcagc gcctccccgc
121 ctggcagccg ctgctgtcgg ccagcatcgc gctgccgctc ttcttctgcg cgggcctggc
181 cttcatcggc ctgggcctgg gcctctacta ctcctccaac ggcatcaagg agctggagta
241 cgactataca ggcgacccgg gcaccggtaa ctgctcggtg tgcgccgcgg ctggccaggg
301 ccgggcgctg ccgcccccct gctcgtgcgc ctggtacttc tcgctgcccg agctcttcca
361 gggcccagtg tacctctact acgagctgac caacttctac cagaacaacc ggcgctacgg
421 cgtgtcccgc gacgacgcgc agctgagcgg actccccagc gcgctgcgcc accctgtcaa
481 cgagtgcgcc ccctaccagc gcagcgcggc cggcctgccc atcgcgccct gcggcgccat
541 cgccaacagc ctcttcaacg actccttctc gctttggcac cagcgccagc ccggcgggcc
601 ctacgtcgag gtgccgctcg accgctccgg catcgcctgg tggaccgact accacgtcaa
661 gttccgcaac ccgccgctgg tcaacggcag cctggcgttg gccttccagg gcacggcgcc
721 cccgcccaac tggcgccggc cagtctacga gctcagcccc gaccccaaca acaccggctt
781 catcaatcag gacttcgtgg tgtggatgcg cacggcggcg ctgcccacgt tccgcaaact
841 gtacgcgcgc atccgccagg gcaactactc ggccgggctg ccgcggggcg cctaccgcgt
901 caacatcacc tacaactacc cggtgcgcgc gttcggcggc cacaagctcc tcatcttcag
961 cagcatctcg tggatgggtg gcaagaaccc cttcctgggc atcgcctacc tggtcgtcgg
1021 ctccctctgc atcctcaccg gctttgtcat gctggtcgtc tacattcgct accaggacca
1081 ggacgacgac gacgaggagt gattccggct ttccagggat ccctcctgct tcttgccaaa
1141 actcttgcaa ggtgcttttg gcatctcctc ctcgcccgtc a
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