LOCUS BC113500 1476 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens CCR4 carbon catabolite repression 4-like (S.
cerevisiae), mRNA (cDNA clone MGC:142060 IMAGE:8322552), complete
cds.
ACCESSION BC113500
VERSION BC113500.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1476)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1476)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: f Column: 22.
FEATURES Location/Qualifiers
source 1..1476
/db_xref="H-InvDB:HIT000386953"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142060 IMAGE:8322552"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GAAGCGCT"
gene 1..1476
/gene="CCRN4L"
/gene_synonym="CCR4L"
/gene_synonym="MGC4120817"
/gene_synonym="NOC"
/db_xref="GeneID:25819"
/db_xref="HGNC:HGNC:14254"
/db_xref="MIM:608468"
CDS 88..1383
/gene="CCRN4L"
/gene_synonym="CCR4L"
/gene_synonym="MGC4120817"
/gene_synonym="NOC"
/codon_start=1
/product="CCR4 carbon catabolite repression 4-like (S.
cerevisiae)"
/protein_id="AAI13501.1"
/db_xref="GeneID:25819"
/db_xref="HGNC:HGNC:14254"
/db_xref="MIM:608468"
/translation="MFHSPRRLCSALLQRDAPGLRRLPAPGLRRPLSPPAAVPRPASP
RLLAAASAASGAARSCSRTVCSMGTGTSRLYSALAKTLNSSAASQHPEYLVSPDPEHL
EPIDPKELLEECRAVLHTRPPRFQRDFVDLRTDCPSTHPPIRVMQWNILAQALGEGKD
NFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFP
KPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKES
GRQFCIAVTHLKARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVY
KHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYSKHALNVRSAL
DLLTEEQIGPNRLPSFNYPSDHLSLVCDFSFTEESDGLS"
BASE COUNT 325 a 437 c 366 g 348 t
ORIGIN
1 gacagtcggc tcgactcggt gccctcggcc ccagccgggc tccgctcctc gggcgcgcga
61 ggggccgtgg tggcggcggc gcccggcatg tttcatagtc cgcggcggct ctgctcggcc
121 ctgctgcaga gggacgcgcc cggcctgcgc cgcctgcccg ccccagggct gcgccgcccg
181 ttgtccccgc cggctgctgt tcccaggccc gcatcccccc ggctgctggc ggcggcctcg
241 gcggcctcgg gcgccgcgag gtcgtgttcc cgaacagtgt gttccatggg aaccggtaca
301 agcagactct atagtgctct cgccaagaca ctgaacagca gcgctgcctc ccagcaccca
361 gagtatttgg tgtcacctga cccagagcat ctggagccca ttgatcctaa agagcttctt
421 gaggaatgca gggccgtcct gcacacccga cctccccggt tccagaggga ttttgtggat
481 ctgaggacag attgccctag tacccaccca cctatcaggg ttatgcaatg gaacatcctc
541 gcccaagctc ttggagaagg caaagacaac tttgtacagt gccctgttga agcactcaaa
601 tgggaagaaa ggaaatgtct catcctggaa gaaatcctgg cctaccagcc tgatatattg
661 tgcctccaag aggtggacca ctattttgac accttccagc cactcctcag tagactaggc
721 tatcaaggca cgtttttccc caaaccctgg tcaccttgtc tagatgtaga acacaacaat
781 ggaccagatg gttgtgcctt attttttctt caaaaccgat tcaagctagt caacagtgcc
841 aatattaggc tgacagccat gacattgaaa accaaccagg tggccattgc acagaccctg
901 gagtgcaagg agtcaggccg acagttctgc atcgctgtta cccatctaaa agcacgcact
961 ggctgggagc ggtttcgatc agctcaaggc tgtgacctcc ttcagaacct gcaaaacatc
1021 acccaaggag ccaagattcc ccttattgtg tgtggggact tcaatgcaga gccaacagaa
1081 gaggtctaca aacactttgc ttcctccagc ctcaacctga acagcgccta caagctgctg
1141 agtgctgatg ggcagtcaga acccccatac actacctgga agatccggac ctcaggggag
1201 tgcaggcaca ccctggatta catctggtat tctaaacatg ctctaaatgt aaggtcagct
1261 ctcgatctgc tcactgaaga acagattgga cccaacaggt taccttcctt caattatcct
1321 tcagaccacc tgtctctagt gtgtgacttc agctttactg aggaatctga tggactttca
1381 taaatacttg cttttgtctt tttaatcaca ggagtctatt tttttttttt tttttttttt
1441 tttttgagac agagtctcgc tctgttgcct aggctg
//