LOCUS       BC113464                2646 bp    mRNA    linear   HUM 29-JUN-2006
DEFINITION  Homo sapiens cadherin 17, LI cadherin (liver-intestine), mRNA (cDNA
            clone MGC:142024 IMAGE:8322516), complete cds.
ACCESSION   BC113464
VERSION     BC113464.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2646)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 5 Row: e Column: 10.
FEATURES             Location/Qualifiers
     source          1..2646
                     /db_xref="H-InvDB:HIT000386917"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:142024 IMAGE:8322516"
                     /tissue_type="Cerebellum, Uterus, Testis, PCR rescued
                     clones"
                     /clone_lib="NIH_MGC_337"
                     /lab_host="DH10B"
                     /note="Vector: pCR4-TOPO; Clone identification sequence
                     tag: CTAGAGCA"
     gene            1..2646
                     /gene="CDH17"
                     /gene_synonym="CDH16"
                     /gene_synonym="HPT-1"
                     /gene_synonym="HPT1"
                     /db_xref="GeneID:1015"
                     /db_xref="HGNC:HGNC:1756"
                     /db_xref="MIM:603017"
     CDS             87..2585
                     /gene="CDH17"
                     /gene_synonym="CDH16"
                     /gene_synonym="HPT-1"
                     /gene_synonym="HPT1"
                     /codon_start=1
                     /product="cadherin 17, LI cadherin (liver-intestine)"
                     /protein_id="AAI13465.1"
                     /db_xref="GeneID:1015"
                     /db_xref="HGNC:HGNC:1756"
                     /db_xref="MIM:603017"
                     /translation="MILQAHLHSLCLLMLYLATGYGQEGKFSGPLKPMTFSIYEGQEP
                     SQIIFQFKANPPAVTFELTGETDNIFVIEREGLLYYNRALDRETRSTHNLQVAALDAN
                     GIIVEGPVPITIEVKDINDNRPTFLQSKYEGSVRQNSRPGKPFLYVNATDLDDPATPN
                     GQLYYQIVIQLPMINNVMYFQINNKTGAISLTREGSQELNPAKNPSYNLVISVKDMGG
                     QSENSFSDTTSVDIIVTENIWKAPKPVEMVENSTDPHPIKITQVRWNDPGAQYSLVDK
                     EKLPRFPFSIDQEGDIYVTQPLDREEKDAYVFYAVAKDEYGKPLSYPLEIHVKVKDIN
                     DNPPTCPSPVTVFEVQENERLGNSIGTLTAHDRDEENTANSFLNYRIVEQTPKLPMDG
                     LFLIQTYAGMLQLAKQSLKKQDTPQYNLTIEVSDKDFKTLCFVQINVIDINDQIPIFE
                     KSDYGNLTLAEDTNIGSTILTIQATDADEPFTGSSKILYHIIKGDSEGRLGVDTDPHT
                     NTGYVIIKKPLDFETAAVSNIVFKAENPEPLVFGVKYNASSFAKFTLIVTDVNEAPQF
                     SQHVFQAKVSEDVAIGTKVGNVTAKDPEGLDISYSLRGDTRGWLKIDHVTGEIFSVAP
                     LDREAGSPYRVQVVATEVGGSSLSSVSEFHLILMDVNDNPPRLAKDYTGLFFCHPLSA
                     PGSLIFEATDDDQHLFRGPHFTFSLGSGSLQNDWEVSKINGTHARLSTRHTDFEEREY
                     VVLIRINDGGRPPLEGIVSLPVTFCSCVEGSCFRPAGHQTGIPTVGMAVGILLTTLLV
                     IGIILAVVFIRIKKDKGKDNVESAQASEVKPLRS"
BASE COUNT          785 a          579 c          597 g          685 t
ORIGIN      
        1 gcaagagtct cgaccactga atggaagaaa aggactttta accaccattt tgtgacttac
       61 agaaaggaat ttgaataaag aaaactatga tacttcaggc ccatcttcac tccctgtgtc
      121 ttcttatgct ttatttggca actggatatg gccaagaggg gaagtttagt ggacccctga
      181 aacccatgac attttctatt tatgaaggcc aagaaccgag tcaaattata ttccagttta
      241 aggccaatcc tcctgctgtg acttttgaac taactgggga gacagacaac atatttgtga
      301 tagaacggga gggacttctg tattacaaca gagccttgga cagggaaaca agatctactc
      361 acaatctcca ggttgcagcc ctggacgcta atggaattat agtggagggt ccagtcccta
      421 tcaccataga agtgaaggac atcaacgaca atcgacccac gtttctccag tcaaagtacg
      481 aaggctcagt aaggcagaac tctcgcccag gaaagccctt cttgtatgtc aatgccacag
      541 acctggatga tccggccact cccaatggcc agctttatta ccagattgtc atccagcttc
      601 ccatgatcaa caatgttatg tactttcaga tcaacaacaa aacgggagcc atctctctta
      661 cccgagaggg atctcaggaa ttgaatcctg ctaagaatcc ttcctataat ctggtgatct
      721 cagtgaagga catgggaggc cagagtgaga attccttcag tgataccaca tctgtggata
      781 tcatagtgac agagaatatt tggaaagcac caaaacctgt ggagatggtg gaaaactcaa
      841 ctgatcctca ccccatcaaa atcactcagg tgcggtggaa tgatcccggt gcacaatatt
      901 ccttagttga caaagagaag ctgccaagat tcccattttc aattgaccag gaaggagata
      961 tttacgtgac tcagcccttg gaccgagaag aaaaggatgc atatgttttt tatgcagttg
     1021 caaaggatga gtacggaaaa ccactttcat atccgctgga aattcatgta aaagttaaag
     1081 atattaatga taatccacct acatgtccgt caccagtaac cgtatttgag gtccaggaga
     1141 atgaacgact gggtaacagt atcgggaccc ttactgcaca tgacagggat gaagaaaata
     1201 ctgccaacag ttttctaaac tacaggattg tggagcaaac tcccaaactt cccatggatg
     1261 gactcttcct aatccaaacc tatgctggaa tgttacagtt agctaaacag tccttgaaga
     1321 agcaagatac tcctcagtac aacttaacga tagaggtgtc tgacaaagat ttcaagaccc
     1381 tttgttttgt gcaaatcaac gttattgata tcaatgatca gatccccatc tttgaaaaat
     1441 cagattatgg aaacctgact cttgctgaag acacaaacat tgggtccacc atcttaacca
     1501 tccaggccac tgatgctgat gagccattta ctgggagttc taaaattctg tatcatatca
     1561 taaagggaga cagtgaggga cgcctggggg ttgacacaga tccccatacc aacaccggat
     1621 atgtcataat taaaaagcct cttgattttg aaacagcagc tgtttccaac attgtgttca
     1681 aagcagaaaa tcctgagcct ctagtgtttg gtgtgaagta caatgcaagt tcttttgcca
     1741 agttcacgct tattgtgaca gatgtgaatg aagcacctca attttcccaa cacgtattcc
     1801 aagcgaaagt cagtgaggat gtagctatag gcactaaagt gggcaatgtg actgccaagg
     1861 atccagaagg tctggacata agttattcac tgaggggaga cacaagaggt tggcttaaaa
     1921 ttgaccacgt gactggtgag atctttagtg tggctccatt ggacagagaa gccggaagtc
     1981 catatcgggt acaagtggtg gccacagaag taggggggtc ttccttgagc tctgtgtcag
     2041 agttccacct gatccttatg gatgtgaatg acaaccctcc caggctagcc aaggactaca
     2101 cgggcttgtt cttctgccat cccctcagtg cacctggaag tctcattttt gaggctactg
     2161 atgatgatca gcacttattt cggggtcccc attttacatt ttccctcggc agtggaagct
     2221 tacaaaacga ctgggaagtt tccaaaatca atggtactca tgcccgactg tctaccaggc
     2281 acacagactt tgaggagagg gagtatgtcg tcttgatccg catcaatgat gggggtcggc
     2341 cacccttgga aggcattgtt tctttaccag ttacattctg cagttgtgtg gaaggaagtt
     2401 gtttccggcc agcaggtcac cagactggga tacccactgt gggcatggca gttggtatac
     2461 tgctgaccac ccttctggtg attggtataa ttttagcagt tgtgtttatc cgcataaaga
     2521 aggataaagg caaagataat gttgaaagtg ctcaagcatc tgaagtcaaa cctctgagaa
     2581 gctgaatttg aaaaggaatg tttgaattta tatagcaagt gctatttcag caacaaccat
     2641 ctcatc
//