LOCUS BC113455 5444 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens laminin, beta 1, mRNA (cDNA clone MGC:142015
IMAGE:8322507), complete cds.
ACCESSION BC113455
VERSION BC113455.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5444)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5444)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: e Column: 1.
FEATURES Location/Qualifiers
source 1..5444
/db_xref="H-InvDB:HIT000386908"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:142015 IMAGE:8322507"
/tissue_type="Colon, PCR rescued clones"
/clone_lib="NIH_MGC_295"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AATCATTG"
gene 1..5444
/gene="LAMB1"
/db_xref="GeneID:3912"
/db_xref="HGNC:HGNC:6486"
/db_xref="MIM:150240"
CDS 44..5404
/gene="LAMB1"
/codon_start=1
/product="laminin, beta 1"
/protein_id="AAI13456.1"
/db_xref="GeneID:3912"
/db_xref="HGNC:HGNC:6486"
/db_xref="MIM:150240"
/translation="MGLLQLLAFSFLALCRARVRAQEPEFSYGCAEGSCYPATGDLLI
GRAQKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTT
FAPNRLKIWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTW
GVYRYFAYDCEASFPGISTGPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIED
PYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGH
ASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKK
CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDP
NFCERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSE
DPFGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCR
PCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYYFATLDHYLYEAEEANLGP
GVSIVERQYIQDRIPSWTGAGFVRVPEGAYLEFFIDNIPYSMEYDILIRYEPQLPDHW
EKAVITVQRPGRIPTSSRCGNTIPDDDNQVVSLSPGSRYVVLPRPVCFEKGTNYTVRL
ELPQYTSSDSDVESPYTLIDSLVLMPYCKSLDIFTVGGSGDGVVTNSAWETFQRYRCL
ENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNV
VGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLP
GHWGFPSCQPCQCNGHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHC
RPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGS
CQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVC
NYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNA
AHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQ
STGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIAELTNRTHRFLEKA
KALKISGVIGPYRETVDSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTE
MMAQVEVKLSDTTSQSNSTAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNASTTEPNSTVEQSALMRDRVEDVMMERESQFKEKQEEQARLL
DELAGKLQSLDLSAAAEMTCGTPPGASCSETECGGPNCRTDEGERKCGGPGCGGLVTV
AHNAWQKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMD
KSNEELRNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVE
SLSQVEVILQHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAE
KAIKQADEDIQGTQNLLTSIESETAASEETLFNASQRISELERNVEELKRKAAQNSGE
AEYIEKVVYTVKQSAEDVKKTLDGELDEKYKKVENLIAKKTEESADARRKAEMLQNEA
KTLLAQANSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYST
CL"
BASE COUNT 1505 a 1252 c 1446 g 1241 t
ORIGIN
1 tctccactcc tctgccgcgt ccccgtggct gcagggagcc ggcatggggc ttctccagtt
61 gctagctttc agtttcttag ccctgtgcag agcccgagtg cgcgctcagg aacccgagtt
121 cagctacggc tgcgcagaag gcagctgcta tcccgccacg ggcgaccttc tcatcggccg
181 agcacagaag ctttcggtga cctcgacgtg cgggctgcac aagcccgaac cctactgtat
241 cgtcagccac ttgcaggagg acaaaaaatg cttcatatgc aattcccaag atccttatca
301 tgagaccctg aatcctgaca gccatctcat tgaaaatgtg gtcactacat ttgctccaaa
361 ccgccttaag atttggtggc aatctgaaaa tggtgtggaa aatgtaacta tccaactgga
421 tttggaagca gaattccatt ttactcatct cataatgact ttcaagacat tccgtccagc
481 tgctatgctg atagaacgat cgtccgactt tgggaaaacc tggggtgtgt atagatactt
541 cgcctatgac tgtgaggcct cgtttccagg catttcaact ggccccatga aaaaagtcga
601 tgacataatt tgtgattctc gatattctga cattgaaccc tcaactgaag gagaggtgat
661 atttcgtgct ttagatcctg ctttcaaaat agaagatcct tatagcccaa ggatacagaa
721 tttattaaaa attaccaact tgagaatcaa gtttgtgaaa ctgcatactt tgggagataa
781 ccttctggat tccaggatgg aaatcagaga aaagtattat tatgcagttt atgatatggt
841 ggttcgagga aattgcttct gctatggtca tgccagcgaa tgtgcccctg tggatggatt
901 caatgaagaa gtggaaggaa tggttcacgg acactgcatg tgcaggcata acaccaaggg
961 cttaaactgt gaactctgca tggatttcta ccatgattta ccttggagac ctgctgaagg
1021 ccgaaacagc aacgcctgta aaaaatgtaa ctgcaatgaa cattccatct cttgtcactt
1081 tgacatggct gtttacctgg ccacggggaa cgtcagcgga ggcgtgtgtg atgactgtca
1141 gcacaacacc atggggcgca actgtgagca gtgcaagccg ttttactacc agcacccaga
1201 gagggacatc cgagatccta atttctgtga acgatgtacg tgtgacccag ctggctctca
1261 aaatgaggga atttgtgaca gctatactga tttttctact ggtctcattg ctggccagtg
1321 tcggtgtaaa ttaaatgtgg aaggagaaca ttgtgatgtt tgcaaagaag gcttctatga
1381 tttaagcagt gaagatccat ttggttgtaa atcttgtgct tgcaatcctc tgggaacaat
1441 tcctggaggg aatccttgtg attccgagac aggtcactgc tactgcaagc gtctggtgac
1501 aggacagcat tgtgaccagt gcctgccaga gcactggggc ttaagcaatg atttggatgg
1561 atgtcgacca tgtgactgtg accttggggg agccttaaac aacagttgct ttgcggagtc
1621 aggccagtgc tcatgccggc ctcacatgat tggacgtcag tgcaacgaag tggaacctgg
1681 ttactacttt gccaccctgg atcactacct ctatgaagcg gaggaagcca acttggggcc
1741 tggggttagc atagtggagc ggcaatatat ccaggaccgg attccctcct ggactggagc
1801 cggcttcgtc cgagtgcctg aaggggctta tttggagttt ttcattgaca acataccata
1861 ttccatggag tacgacatcc taattcgcta cgagccacag ctacccgacc actgggaaaa
1921 agctgtcatc acagtgcagc gacctggaag gattccaacc agcagccgat gtggtaatac
1981 catccccgat gatgacaacc aggtggtgtc attatcacca ggctcaagat atgtcgtcct
2041 tcctcggccg gtgtgctttg agaagggaac aaactacacg gtgaggttgg agctgcctca
2101 gtacacctcc tctgatagcg acgtggagag cccctacacg ctgatcgatt ctcttgttct
2161 catgccatac tgtaaatcac tggacatctt caccgtggga ggttcaggag atggggtggt
2221 caccaacagt gcctgggaaa cctttcagag ataccgatgt ctagagaaca gcagaagcgt
2281 tgtgaaaaca ccgatgacag atgtttgcag aaacatcatc tttagcattt ctgccctgtt
2341 acaccagaca ggcctggctt gtgaatgcga ccctcagggt tcgttaagtt ccgtgtgtga
2401 tcccaacgga ggccagtgcc agtgccggcc caacgtggtt ggaagaacct gcaacagatg
2461 tgcacctgga acttttggct ttggccccag tggatgcaaa ccttgtgagt gccatctgca
2521 aggatctgtc aatgccttct gcaatcccgt cactggccag tgccactgtt tccagggagt
2581 gtatgctcgg cagtgtgatc ggtgcttacc tgggcactgg ggctttccaa gttgccagcc
2641 ctgccagtgc aatggccacg ccgatgactg cgacccagtg actggggagt gcttgaactg
2701 ccaggactac accatgggtc ataactgtga aaggtgcttg gctggttact atggcgaccc
2761 catcattggg tcaggagatc actgccgccc ttgcccttgc ccagatggtc ccgacagtgg
2821 acgccagttt gccaggagct gctaccaaga tcctgttact ttacagcttg cctgtgtttg
2881 tgatcctgga tacattggtt ccagatgtga cgactgtgcc tcaggatact ttggcaatcc
2941 atcagaagtt ggggggtcgt gtcagccttg ccagtgtcac aacaacattg acacgacaga
3001 cccagaagcc tgtgacaagg agactgggag gtgtctcaag tgcctgtacc acacggaagg
3061 ggaacactgt cagttctgcc ggtttggata ctatggtgat gccctccagc aggactgtcg
3121 aaagtgtgtc tgtaattacc tgggcaccgt gcaagagcac tgtaacggct ctgactgcca
3181 gtgcgacaaa gccactggtc agtgcttgtg tcttcctaat gtgatcgggc agaactgtga
3241 ccgctgtgcg cccaatacct ggcagctggc cagtggcact ggctgtgacc catgcaactg
3301 caatgctgct cattccttcg ggccatcttg caatgagttc acggggcagt gccagtgcat
3361 gcctgggttt ggaggccgca cctgcagcga gtgccaggaa ctcttctggg gagaccccga
3421 cgtggagtgc cgagcctgtg actgtgaccc caggggcatt gagacgccac agtgtgacca
3481 gtccacgggc cagtgtgtct gcgttgaggg tgttgagggt ccacgctgtg acaagtgcac
3541 gcgagggtac tcgggggtct tccctgactg cacaccctgc caccagtgct ttgctctctg
3601 ggatgtgatc attgccgagc tgaccaacag gacacacaga ttcctggaga aagccaaggc
3661 cttgaagatc agtggtgtga tcgggcctta ccgtgagact gtggactcgg tggagaggaa
3721 agtcagcgag ataaaagaca tcctggcgca gagccccgca gcagagccac tgaaaaacat
3781 tgggaatctc tttgaggaag cagagaaact gattaaagat gttacagaaa tgatggctca
3841 agtagaagtg aaattatctg acacaacttc ccaaagcaac agcacagcca aagaactgga
3901 ttctctacag acagaagccg aaagcctaga caacactgtg aaagaacttg ctgaacaact
3961 ggaatttatc aaaaactcag atattcgggg tgccttggat agcattacca agtatttcca
4021 gatgtctctt gaggcagagg agagggtgaa tgcctccacc acagaaccca acagcactgt
4081 ggagcagtca gccctcatga gagacagagt agaagacgtg atgatggagc gagaatccca
4141 gttcaaggaa aaacaagagg agcaggctcg cctccttgat gaactggcag gcaagctaca
4201 aagcctagac ctttcagccg ctgccgaaat gacctgtgga acacccccag gggcctcctg
4261 ttccgagact gaatgtggcg ggccaaactg cagaactgac gaaggagaga ggaagtgtgg
4321 ggggcctggc tgtggtggtc tggttactgt tgcacacaac gcctggcaga aagccatgga
4381 cttggaccaa gatgtcctga gtgccctggc tgaagtggaa cagctctcca agatggtctc
4441 tgaagcaaaa ctgagggcag atgaggcaaa acaaagtgct gaagacattc tgttgaagac
4501 aaatgctacc aaagaaaaaa tggacaagag caatgaggag ctgagaaatc taatcaagca
4561 aatcagaaac tttttgaccc aggatagtgc tgatttggac agcattgaag cagttgctaa
4621 tgaagtattg aaaatggaga tgcctagcac cccacagcag ttacagaact tgacagaaga
4681 tatacgtgaa cgagttgaaa gcctttctca agtagaggtt attcttcagc atagtgctgc
4741 tgacattgcc agagctgaga tgttgttaga agaagctaaa agagcaagca aaagtgcaac
4801 agatgttaaa gtcactgcag atatggtaaa ggaagctctg gaagaagcag aaaaggccca
4861 ggtcgcagca gagaaggcaa ttaaacaagc agatgaagac attcaaggaa cccagaacct
4921 gttaacttcg attgagtctg aaacagcagc ttctgaggaa accttgttca acgcgtccca
4981 gcgcatcagc gagttagaga ggaatgtgga agaacttaag cggaaagctg cccaaaactc
5041 cggggaggca gaatatattg aaaaagtagt atatactgtg aagcaaagtg cagaagatgt
5101 taagaagact ttagatggtg aacttgatga aaagtataaa aaagtagaaa atttaattgc
5161 caaaaaaact gaagagtcag ctgatgccag aaggaaagcc gaaatgctac aaaatgaagc
5221 aaaaactctt ttagctcaag caaatagcaa gctgcaactg ctcaaagatt tagaaagaaa
5281 atatgaagac aatcaaagat acttagaaga taaagctcaa gaattagcaa gactggaagg
5341 agaagtccgt tcactcctaa aggatataag ccagaaagtt gctgtgtata gcacatgctt
5401 gtaacagagg agaataaaaa atggctgagg tgaacaaggt aaaa
//