LOCUS BC113437 1676 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens forkhead box C2 (MFH-1, mesenchyme forkhead 1), mRNA
(cDNA clone MGC:141997 IMAGE:8322489), complete cds.
ACCESSION BC113437
VERSION BC113437.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1676)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1676)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: d Column: 7.
FEATURES Location/Qualifiers
source 1..1676
/db_xref="H-InvDB:HIT000386890"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:141997 IMAGE:8322489"
/tissue_type="Pooled, bladder, uterus, PCR rescued clones"
/clone_lib="NIH_MGC_357"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CGCAAAAC"
gene 1..1676
/gene="FOXC2"
/gene_synonym="LD"
/gene_synonym="MFH-1"
/gene_synonym="MFH1"
/db_xref="GeneID:2303"
/db_xref="HGNC:HGNC:3801"
/db_xref="MIM:602402"
CDS 86..1591
/gene="FOXC2"
/gene_synonym="LD"
/gene_synonym="MFH-1"
/gene_synonym="MFH1"
/codon_start=1
/product="forkhead box C2 (MFH-1, mesenchyme forkhead 1)"
/protein_id="AAI13438.1"
/db_xref="GeneID:2303"
/db_xref="HGNC:HGNC:3801"
/db_xref="MIM:602402"
/translation="MQARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGH
PEQYSAGMGRSYAPYHHHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFI
MDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGS
FLRRRRRFKKKDVSKEKEERAHLKEPPPAASKGAPATPHLADAPKEAEKKVVIKSEAA
SPALPVITKVETLSPESALQGSPRSAASTPAGSPDGSLPEHHAAAPNGLPGFSVENIM
TLRTSPPGGELSPGAGRAGLVVPPLALPYAAAPPAAYGQPCAQGLEAGAAGGYQCSMR
AMSLYTGAERPAHMCVPPALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHH
GHHHPQAPPPPPAPQPQPTPQPGAAAAQAASWYLNHSGDLNHLPGHTFAAQQQTFPNV
REMFNSHRLGIENSTLGESQVSGNASCQLPYRSTPPLYRHAAPYSYDCTKY"
BASE COUNT 291 a 671 c 519 g 195 t
ORIGIN
1 cgcgctctct cgctctcagg gcccccctcg ctcccccggc cgcagtccgt gcgcgagggc
61 gccggcgagc cgtctcggaa gcagcatgca ggcgcgctac tccgtgtccg accccaacgc
121 cctgggagtg gtgccctacc tgagcgagca gaattactac cgggctgcgg gcagctacgg
181 cggcatggcc agccccatgg gcgtctattc cggccacccg gagcagtaca gcgcggggat
241 gggccgctcc tacgcgccct accaccacca ccagcccgcg gcgcctaagg acctggtgaa
301 gccgccctac agctacatcg cgctcatcac catggccatc cagaacgcgc ccgagaagaa
361 gatcaccttg aacggcatct accagttcat catggaccgc ttccccttct accgggagaa
421 caagcagggc tggcagaaca gcatccgcca caacctctcg ctcaacgagt gcttcgtcaa
481 ggtgccccgc gacgacaaga agcccggcaa gggcagttac tggaccctgg acccggactc
541 ctacaacatg ttcgagaacg gcagcttcct gcggcgccgg cggcgcttca aaaagaagga
601 cgtgtccaag gagaaggagg agcgggccca cctcaaggag ccgcccccgg cggcgtccaa
661 gggcgccccg gccacccccc acctagcgga cgcccccaag gaggccgaga agaaggtggt
721 gatcaagagc gaggcggcgt ccccggcgct gccggtcatc accaaggtgg agacgctgag
781 ccccgagagc gcgctgcagg gcagcccgcg cagcgcggcc tccacgcccg ccggctcccc
841 cgacggctcg ctgccggagc accacgccgc ggcgcccaac gggctgcctg gcttcagcgt
901 ggagaacatc atgaccctgc gaacgtcgcc gccgggcgga gagctgagcc cgggggccgg
961 acgcgcgggc ctggtggtgc cgccgctggc gctgccctac gccgccgcgc cgcccgccgc
1021 ctacggccag ccgtgcgctc agggcctgga ggccggggcc gccgggggct accagtgcag
1081 catgcgagcg atgagcctgt acaccggggc cgagcggccg gcgcacatgt gcgtcccgcc
1141 cgccctggac gaggccctct cggaccaccc gagcggcccc acgtcgcccc tgagcgctct
1201 caacctcgcc gccggccagg agggcgcgct cgccgccacg ggccaccacc accagcacca
1261 cggccaccac cacccgcagg cgccgccgcc cccgccggct ccccagcccc agccgacgcc
1321 gcagcccggg gccgccgcgg cgcaggcggc ctcctggtat ctcaaccaca gcggggacct
1381 gaaccacctc cccggccaca cgttcgcggc ccagcagcaa actttcccca acgtgcggga
1441 gatgttcaac tcccaccggc tggggattga gaactcgacc ctcggggagt cccaggtgag
1501 tggcaatgcc agctgccagc tgccctacag atccacgccg cctctctatc gccacgcagc
1561 cccctactcc tacgactgca cgaaatactg acgtgtcccg ggacctcccc tccccggccc
1621 gctccggctt cgcttcccag ccccgaccca accagacaat taaggggctg cagaga
//