LOCUS BC113393 1533 bp mRNA linear HUM 08-JUL-2008 DEFINITION Homo sapiens Zic family member 3 (odd-paired homolog, Drosophila), mRNA (cDNA clone MGC:141953 IMAGE:8322445), complete cds. ACCESSION BC113393 VERSION BC113393.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1533) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1533) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 5 Row: b Column: 11. FEATURES Location/Qualifiers source 1..1533 /db_xref="H-InvDB:HIT000386846" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:141953 IMAGE:8322445" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_310" /note="Vector: pCR4-TOPO; Clone identification sequence tag: CCCCCGCC" gene 1..1533 /gene="ZIC3" /gene_synonym="HTX" /gene_synonym="ZNF203" /db_xref="GeneID:7547" /db_xref="HGNC:HGNC:12874" /db_xref="MIM:300265" CDS 30..1433 /gene="ZIC3" /gene_synonym="HTX" /gene_synonym="ZNF203" /codon_start=1 /product="Zic family member 3 (odd-paired homolog, Drosophila)" /protein_id="AAI13394.1" /db_xref="GeneID:7547" /db_xref="HGNC:HGNC:12874" /db_xref="MIM:300265" /translation="MTMLLDGGPQFPGLGVGSFGAPRHHEMPNREPAGMGLNPFGDST HAAAAAAAAAAFKLSPAAAHDLSSGQSSAFTPQGSGYANALGHHHHHHHHHHHTSQVP SYGGAASAAFNSTREFLFRQRSSGLSEAASGGGQHGLFAGSASSLHAPAGIPEPPSYL LFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVASPRTDPYAAGAQFPN YSPMNMNMGVNVAAHHGPGAFFRYMRQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMH ELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKV CDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAIASANSKDTTKTPSAVQT STSHNPGLPPNFNEWYV" BASE COUNT 342 a 509 c 416 g 266 t ORIGIN 1 ggatcgcctg tgcccagaac gtcccaccca tgacgatgct cctggacgga ggcccgcagt 61 tccctgggct gggagtgggc agcttcggcg cgccgcgcca ccacgagatg cccaaccgtg 121 agccggcagg catggggctg aatcccttcg gggactcaac ccacgccgcc gccgccgccg 181 ccgccgccgc tgccttcaag ctgagccctg ccgcggcgca cgatctatct tcaggccaga 241 gctcggcttt cacgccgcag ggttcgggct acgccaacgc cctgggccac catcaccacc 301 accatcacca tcatcaccac accagccagg tgcccagcta cggtggcgct gcctctgccg 361 ccttcaactc aacgcgcgag tttctgttcc gccagcgcag ctccgggctc agtgaggcgg 421 cctcgggtgg cgggcagcac gggctcttcg ccggctcggc gagcagcctg catgctccag 481 ctggcatccc cgagccccct agctacttgc tgtttcccgg gctgcatgag cagggcgctg 541 ggcacccgtc gcccacaggg cacgtggaca acaaccaggt ccacctgggg ctgcgtgggg 601 agctgttcgg ccgtgctgac ccataccgcc cagtggccag cccgcgcacg gacccctacg 661 cggccggcgc tcagtttcct aactacagcc ccatgaacat gaacatggga gtgaacgtgg 721 cggcccacca cgggcccggc gccttcttcc gttatatgcg gcagcctatc aagcaggagc 781 tgtcgtgcaa gtggatcgac gaggctcagc tgagccggcc caagaagagc tgcgaccgga 841 ccttcagcac catgcatgag ctggtgacac atgtcaccat ggagcatgtg gggggcccgg 901 agcagaacaa ccacgtctgc tactgggagg agtgcccccg ggagggcaag tctttcaagg 961 cgaagtacaa actggtcaac cacatccgag tgcacacggg cgagaagccc ttcccatgcc 1021 ccttcccggg ctgcgggaag atctttgccc gttctgagaa cctcaagatc cacaagagga 1081 cccacacagg tgagaaacct ttcaaatgtg aatttgaagg ctgtgacaga cgctttgcca 1141 acagcagcga ccgtaagaag cacatgcatg tgcatacctc ggacaagccc tatatctgca 1201 aagtgtgcga caagtcctac acgcacccga gctccctgcg caaacacatg aaggttcatg 1261 aatctcaagg gtcagattcc tcccctgctg ccagttcagg ctatgaatct tccactccac 1321 ccgctatagc ttctgcaaac agtaaagata ccactaaaac cccttctgca gttcaaacta 1381 gcaccagcca caaccctgga cttcctccta attttaacga atggtacgtc tgaggacaaa 1441 cacaaaccct gttaattata gaatggacca aatacatttt taaaagaaaa ctgagaccaa 1501 tcagatggaa atggagtttt aaggcaagag gcc //