LOCUS BC113370 2081 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens non-protein coding RNA 153, mRNA (cDNA clone
MGC:141930 IMAGE:8322422), complete cds.
ACCESSION BC113370
VERSION BC113370.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2081)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2081)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: a Column: 12.
FEATURES Location/Qualifiers
source 1..2081
/db_xref="H-InvDB:HIT000386823"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:141930 IMAGE:8322422"
/tissue_type="Cerebellum, Uterus, Testis, PCR rescued
clones"
/clone_lib="NIH_MGC_337"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AGCCCACA"
gene 1..2081
/gene="NCRNA00153"
/gene_synonym="HT013"
/db_xref="GeneID:55857"
/db_xref="HGNC:HGNC:15865"
CDS 37..2058
/gene="NCRNA00153"
/gene_synonym="HT013"
/codon_start=1
/product="non-protein coding RNA 153"
/protein_id="AAI13371.1"
/db_xref="GeneID:55857"
/db_xref="HGNC:HGNC:15865"
/translation="MSRTLASAVPLSSPDYYERLGQLQHGLRDSEKKRLDLEKKLYEY
NQSDTCRVKLKYVKLKNYLKEICESEKKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQ
KLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVAVQEGINSGTAMSRGLYQPATIFM
GRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQTSNDTQCL
NKSDNIDGKASLQIGEKTPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNS
PLRERLSPENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENK
WSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESP
EPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTR
EPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKALTEECGRRSAIHSSESSC
SLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITETEAYQL
LKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGSP
LSRHENKKKPVINLKSNALWDESDDSNSEIEAALRPRNHNTDDSDDFYD"
BASE COUNT 724 a 430 c 484 g 443 t
ORIGIN
1 ccagaggctg tgctgagctg gcgcagcggc agcagcatga gccggaccct cgcatcggcc
61 gtgcccctgt cgagtcccga ctactacgag aggctgggcc aactccagca cgggctgcgg
121 gacagtgaaa agaagagatt ggacctggaa aagaaacttt atgaatataa tcagtctgat
181 acatgcagag ttaagctgaa atatgtaaaa ctaaagaatt atctgaagga aatatgtgaa
241 tctgaaaaga aggctcatac tcgaaaccaa gaatatttaa agcgatttga gcgtgtccaa
301 gctcatgttg tacacttcac cacaaataca gagaagcttc aaaaactgaa gctcgaatat
361 gagactcaaa ttaagaagat gctatgctca aaagatagcc tgggactaaa agaggaactg
421 acagatgaag acagagaaaa ggttgcagtg caggagggga ttaactcagg aacagccatg
481 tcaagaggat tgtatcaacc agcaacaatc tttatgggcc gccaaatgtc agccatctta
541 agcatgagag atttcagtac agagcacaaa tctccccagc ccacaaagaa cttttcaatt
601 cctgacccac attcacaccg acagacagcc cagagcagta atgtgacaga cagctgtgta
661 gtacaaacta gtaatgacac acagtgctta aataagtctg acaacataga tggaaaggca
721 tctcttcaga ttggtgagaa aacgccagtc acagccagtg tattgtctga ggaggaacaa
781 actcattgct tggagatagg aagtaacaca cgtcatggca agagtaattt atctgaaggc
841 aaaaagtctg ctgaactcaa ttccccgtta cgggaaagat taagtccaga gaacagaacc
901 actgatttaa agtgtgacag ttccagcgga tcagagggag aaatactgac acgggaacat
961 attgaagttg aggaaaaaag agccagcccg ccagtctctc cgataccagt ttcagaatac
1021 tgtgaatctg aaaataagtg gtctcaagag aagcattctc cttgggaagg tgtttcagat
1081 catcttgctc acagggaacc aaagtcacaa aagcccttca gaaaaatgca ggaagaggag
1141 gaggaaagtt ggagcaccag cagtgacctt accatttcaa taagtgaaga tgatctgatt
1201 ttagagagcc cagaaccaca gccaaatcca ggtggcaaga tggagggaga agatggaata
1261 gaggccttaa aattaatcca tgctgagcaa gaaagagttg ccctatccac tgaaaaaaat
1321 tgtattttgc aaaccctaag ctctcctgat tcagaaaagg aatcctccac taacgcacca
1381 acaagagaac ctggacaaac accagactca gacgtaccga gggcacaggt gggtcagcat
1441 gttgccacct tgaaagaaca tgataattct gtcaaagaag aggcaacagc attattgaga
1501 aaagccctta cagaagagtg tggccgtagg tcagctattc acagtagtga atcatcttgc
1561 agcttgccat ctattctgaa tgacaatagt ggaataaagg aagccaaacc tgctgtatgg
1621 ctcaacagtg ttcctacaag ggaacaagaa gtttcaagtg gctgtggaga caagagcaag
1681 aaagaaaatg tggctgcaga tatcccaatc acagaaacag aagcctatca gttgctgaag
1741 aaggccaccc ttcaggataa tacaaatcaa actgaaaaca ggtttcaaaa gacagatgct
1801 tctgtgtcac acttgtcagg tttgaatatt ggcagcggtg cattcgagac aaagacagct
1861 aacaaaattg cttcggaagc tagtttttca tctagtgaag gaagtccttt gtcaaggcat
1921 gaaaacaaaa agaaacccgt gatcaattta aaatctaatg ccctctggga tgagtctgat
1981 gacagtaact cagaaattga ggctgcttta cgccccagaa accataacac cgatgattct
2041 gatgattttt atgactaacg tgctgtgaca ttggtttcaa a
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