LOCUS BC113369 3171 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens pitrilysin metallopeptidase 1, mRNA (cDNA clone
MGC:141929 IMAGE:8322421), complete cds.
ACCESSION BC113369
VERSION BC113369.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3171)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3171)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 5 Row: a Column: 11.
FEATURES Location/Qualifiers
source 1..3171
/db_xref="H-InvDB:HIT000386822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:141929 IMAGE:8322421"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AGCCACTT"
gene 1..3171
/gene="PITRM1"
/gene_synonym="hMP1"
/gene_synonym="KIAA1104"
/gene_synonym="MP1"
/db_xref="GeneID:10531"
/db_xref="HGNC:HGNC:17663"
CDS 26..3139
/gene="PITRM1"
/gene_synonym="hMP1"
/gene_synonym="KIAA1104"
/gene_synonym="MP1"
/codon_start=1
/product="pitrilysin metallopeptidase 1"
/protein_id="AAI13370.1"
/db_xref="GeneID:10531"
/db_xref="HGNC:HGNC:17663"
/translation="MWRCGGRQGLCVLRRLSGGHAHHRAWRWNSNRACERALQYKLGD
KIHGFTVNQVTSVPELFLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGV
PHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLL
SVYLDATFFPCLRELDFWQEGWRLEHENPSDPQTPLVFKGVVFNEMKGAFTDNERIFS
QHLQNRLLPDHTYSVVSGGDPLCIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQH
LKQIHEEALSKFQKIEPSTVVPAQTPWDKPREFQITCGPDSFATDPSKQTTVSVSFLL
PDITDTFEAFTLSLLSSLLTSGPNSPFYKALIESGLGTDFSPDVGYNGYTREAYFSVG
LQGIVEKDIETVRSLIDRTIDEVVEKGFEDDRIEALLHKIEIQMKHQSTSFGLMLTSY
IASCWNHDGDPVELLKLGNQLAKFRQCLQENPKFLQEKVKQYFKNNQHKLTLSMRPDD
KYHEKQAQVEATKLKQKVEALSPGDRQQIYEKGLELRSQQSKPQDASCLPALKVSDIE
PTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRAFSSLNTLPEELRPYVPLFCSVLTK
LGCGLLDYREQAQQIELKTGGMSASPHVLPDDSHMDTYEQGVLFSSLCLDRNLPDMMQ
LWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGHLYASIRAGRTLTPAGDLQETF
SGMDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMRCSVNATPQQMPQTEKAVED
FLRSIGRSKKERRPVRPHTVEKPVPSSSGGDAHVPHGSQVIRKLVMEPTFKPWQMKTH
FLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIREKGGAYGGGAKLSH
NGIFTLYSYRDPNTIETLQSFGKAVDWAKSGKFTQQDIDEAKLSVFSTVDAPVAPSDK
GMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAILGPENPKIAK
DPSWIIR"
BASE COUNT 836 a 838 c 791 g 706 t
ORIGIN
1 gccagccagg tgctcgtcat gcgcaatgtg gcgctgcggc gggcggcagg gcctgtgtgt
61 gctgaggcgg ctgagcggcg gacatgcaca ccacagagcg tggcgatgga acagtaaccg
121 ggcttgtgag agggctctgc agtataaact aggagacaag atccatggat tcaccgtaaa
181 ccaggtgaca tctgttcccg agctgttcct gactgcagtg aagctcaccc atgatgacac
241 aggagccagg tatttacacc tggccagaga agacacgaat aatctgttca gcgtgcagtt
301 ccgtaccact cccatggaca gtactggtgt tcctcacatt cttgagcata ccgtcctttg
361 tgggtctcag aaatatccgt gcagagaccc tttcttcaaa atgttgaacc ggtccctctc
421 cacgttcatg aacgccttca cagctagtga ttatactctg tatccatttt ccacacaaaa
481 tcccaaggac tttcagaatc tcctctcggt gtatttggat gccacctttt tcccatgttt
541 acgcgagctg gatttctggc aggaaggatg gcggctggaa catgagaatc cgagcgaccc
601 ccagacgccc ttggtcttta aaggagtcgt ctttaatgag atgaagggag cgtttacaga
661 caatgagagg atattctccc agcaccttca gaacagactt cttcccgacc acacgtactc
721 agtggtctcc gggggtgacc cactgtgcat cccggagctt acatgggagc agcttaagca
781 gtttcatgcc actcactatc acccaagcaa tgctaggttc ttcacgtacg gtaattttcc
841 attagaacag catctgaaac aaattcacga ggaagcactg agcaaattcc agaaaattga
901 accaagcacc gtggtgccag ctcagacacc ctgggacaag cctagggaat tccagataac
961 atgtggcccg gattcatttg ctacagatcc ctctaaacaa acaaccgtca gcgttagctt
1021 cctcttaccg gacatcaccg acacatttga agccttcaca ttaagtcttc tgtcttcact
1081 cttgacttct gggcccaatt ctccctttta caaagccttg attgaatctg gccttggcac
1141 agacttttct cctgatgttg gatataatgg ctacacgagg gaggcctact ttagtgtcgg
1201 cctccaaggg attgtggaga aagacattga gaccgtcaga agcctcatag acagaacgat
1261 tgatgaagta gttgagaaag gatttgaaga tgatcgaatt gaggctttac ttcataaaat
1321 tgaaatacag atgaaacatc agtctaccag ctttgggctg atgctgacat catacatagc
1381 ttcttgctgg aaccatgatg gggaccctgt ggagctcttg aagttgggaa atcagttagc
1441 taaattcaga cagtgcctgc aggaaaatcc aaaatttttg caagaaaaag taaaacagta
1501 ttttaagaat aaccagcata agctgacttt atcgatgagg ccagatgaca agtatcacga
1561 gaagcaggca caggtggaag ccacgaagct caagcagaag gtcgaggctc tgtcccccgg
1621 agacaggcag cagatctacg agaaaggtct agaattacgg agtcaacaaa gcaaacctca
1681 agatgcctct tgtctgccag cgttgaaagt ttccgatatt gaacccacca tacctgtcac
1741 agagttggac gtggtcctga cagctggaga tatccctgtt cagtactgcg cccagcccac
1801 caatggcatg gtgtatttcc gggccttctc cagcctgaac acactccccg aggagctgag
1861 gccctatgtg cccctcttct gcagcgtcct caccaagctg ggctgcggcc ttcttgacta
1921 ccgggagcag gctcagcaga tagaattgaa gaccggaggg atgagtgctt ctccccacgt
1981 gctccccgac gactcacaca tggacaccta cgagcagggt gtgcttttct cctctctctg
2041 cctggatcga aacctgccag acatgatgca gctatggagt gaaatattta acaacccgtg
2101 ctttgaagaa gaggagcact tcaaggtgct ggtgaagatg accgcccagg agctcgccaa
2161 tggaattcct gactctgggc acctgtacgc atccatcagg gcaggccgga ccctcacgcc
2221 cgcaggggac ctgcaggaga ccttcagcgg gatggatcag gtgcggctga tgaagaggat
2281 tgcagaaatg acagatatca aacccatcct gaggaagctc ccgcgtatca agaaacactt
2341 gttaaatggt gataatatga ggtgttcagt gaatgcgact cctcagcaga tgcctcagac
2401 agaaaaagcg gtcgaagact tccttagaag catcggtcgg agtaaaaagg aacggaggcc
2461 tgtgcgccca cacacggtcg agaaacctgt gcccagcagc tctggtggag atgcccacgt
2521 tccccatggc tcccaggtca ttaggaagct ggtcatggaa cccaccttca agccctggca
2581 gatgaagact cacttcctga tgcccttccc ggtgaattac gtgggtgaat gcatccgaac
2641 tgtcccctac acggacccag atcatgccag tcttaaaatc cttgcacgtt tgatgactgc
2701 caaattcttg catacagaaa ttcgagaaaa aggcggtgct tatggtggag gcgcaaaact
2761 cagccacaat gggattttca ccctttactc ttacagggac ccaaatacaa tagagacgct
2821 ccagtctttt gggaaggctg tcgactgggc taagtctgga aaattcacac agcaagacat
2881 cgacgaagcc aaactttctg tcttctcaac cgtagatgct cctgtcgctc cttcagacaa
2941 aggaatggac cacttcttgt acggcctctc ggatgagatg aagcaggccc acagagagca
3001 gctctttgct gtcagccacg acaagctcct ggccgtgagc gatagatacc tcggcactgg
3061 gaagagcaca cacggcctgg ccatcctcgg acccgagaac ccgaaaattg ccaaggaccc
3121 atcctggatc atccgatgag cagccgtggc gctcgactgc acaggagccc g
//