LOCUS       BC113364                3569 bp    mRNA    linear   HUM 29-JUN-2006
DEFINITION  Homo sapiens collagen, type XIX, alpha 1, mRNA (cDNA clone
            MGC:141924 IMAGE:8322416), complete cds.
ACCESSION   BC113364
VERSION     BC113364.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3569)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3569)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 5 Row: a Column: 6.
FEATURES             Location/Qualifiers
     source          1..3569
                     /db_xref="H-InvDB:HIT000386817"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:141924 IMAGE:8322416"
                     /tissue_type="Brain, cerebral cortex and lung, PCR rescued
                     clones"
                     /clone_lib="NIH_MGC_323"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: CTACATCA"
     gene            1..3569
                     /gene="COL19A1"
                     /gene_synonym="COL9A1L"
                     /gene_synonym="D6S228E"
                     /db_xref="GeneID:1310"
                     /db_xref="HGNC:HGNC:2196"
                     /db_xref="MIM:120165"
     CDS             86..3514
                     /gene="COL19A1"
                     /gene_synonym="COL9A1L"
                     /gene_synonym="D6S228E"
                     /codon_start=1
                     /product="collagen, type XIX, alpha 1"
                     /protein_id="AAI13365.1"
                     /db_xref="GeneID:1310"
                     /db_xref="HGNC:HGNC:2196"
                     /db_xref="MIM:120165"
                     /translation="MRLTGPWKLWLWMSIFLLPASTSVTVRDKTEESCPILRIEGHQL
                     TYDNINKLEVSGFDLGDSFSLRRAFCESDKTCFKLGSALLIRDTIKIFPKGLPEEYSV
                     AAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGKKVVEFMFQATEGDVLNYIFRN
                     RELRPLFDRQWHKLGISIQSQVISLYMDCNLIARRQTDEKDTVDFHGRTVIATRASDG
                     KPVDIELHQLKIYCSANLIAQETCCEISDTKCPEQDGFGNIASSWVTAHASKMSSYLP
                     AKQELKDQCQCIPNKGEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEG
                     SKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGS
                     LGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGGYYNKDNKGND
                     EHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGE
                     PGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGI
                     IGPPGLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQG
                     IGIPGRTGAQGPAGEPGIQGPRGLPGLPGTPGTPGNDGVPGRDGKPGLPGPPGDPIAL
                     PLLGDIGALLKNFCGNCQASVPGLKSNKGEEGGAGEPGKYDSMARKGDIGPRGPPGIP
                     GREGPKGSKGERGYPGIPGEKGDEGLQGIPGIPGAPGPTGPPGLMGRTGHPGPTGAKG
                     EKGSDGPPGKPGPPGPPGIPFNERNGMSSLYKIKGGVNVPSYPGPPGPPGPKGDPGPV
                     GEPGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIG
                     FPGPEGPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKPGL
                     TGMKGAIGPMGPPGNKGSMGSPGHQGPPGSPGIPGIPADAVSFEEIKKYINQEVLRIF
                     EERMAVFLSQLKLPAAMLAAQAYGRPGPPGKDGLPGPPGDPGPQGYRGQKGERGEPGI
                     GLPGSPGLPGTSALGLPGSPGAPGPQGPPGPSGRCNPEDCLYPVSHAHQRTGGN"
BASE COUNT         1019 a          811 c         1045 g          694 t
ORIGIN      
        1 cagccctgtc cggactccac tgcgcctctg aggggctcaa atacgaattc aagatccgtg
       61 gccgttcaca tggtttcaag gcacaatgag actcactggc ccttggaaac tttggctttg
      121 gatgtcaata tttctgcttc ctgcttccac ttccgtgacc gttagggaca agacagaaga
      181 gtcatgccct atcctgagaa tagagggaca tcagctgaca tatgacaaca taaacaaact
      241 tgaagtttca ggttttgatc taggagacag cttttctcta agacgtgcat tttgtgaaag
      301 tgataaaacc tgtttcaaat tgggaagtgc acttcttatt agagacacta ttaagatatt
      361 tcccaaaggc cttcctgagg agtactcagt agctgccatg tttcgagtac gaagaaacgc
      421 caaaaaggaa cggtggtttc tgtggcaggt tttaaaccag cagaatattc cacagatttc
      481 tatagtagtt gatggtggaa agaaggtggt ggaatttatg tttcaagcca cagagggaga
      541 tgtgttgaac tacattttta gaaatcgaga actccgtcct ttgtttgatc gtcagtggca
      601 caaacttggc attagtatac aatcccaggt catttcactt tatatggatt gtaatttaat
      661 tgcgaggagg cagactgatg aaaaggacac tgtggatttc catggacgga cagttattgc
      721 tacgcgagct tcagatggca agcctgtgga tattgaactt caccaactta aaatctactg
      781 cagtgcaaac ctcatagctc aagaaacatg ttgtgaaata tcagatacta agtgcccaga
      841 gcaggatggc tttggaaata ttgcatcatc atgggtaact gctcatgcca gtaaaatgtc
      901 ttcatatctg ccagcaaagc aggaacttaa agaccagtgc cagtgcattc caaacaaggg
      961 agaagcagga ttaccaggag ctccgggttc acctgggcag aaagggcata aaggagagcc
     1021 gggtgaaaat ggtttacatg gtgctccagg attccctggt caaaagggag agcaaggttt
     1081 tgaaggcagc aaaggagaaa ctggtgaaaa gggtgaacaa ggagaaaaag gagatccagc
     1141 tctggctggc cttaatggag aaaatggttt gaaaggtgac ttgggtcctc atggtccacc
     1201 tggcccaaaa ggagaaaagg gagatacagg acccccagga ccaccagcct tacctggttc
     1261 cctggggata caaggccccc aaggtccacc tggaaaagag ggtcagaggg gaagacgagg
     1321 gaaaacagga cctcccggaa aaccaggacc cccaggacca cctggacctc ctggaataca
     1381 aggaatacac caaactcttg gtggatatta taacaaggat aacaagggaa atgatgaaca
     1441 tgaagctgga ggcctgaaag gagacaaggg tgaaactgga ctaccaggat ttccagggtc
     1501 tgttggccct aaaggacaaa aaggagaacc tggagagcct tttacaaaag gagaaaaagg
     1561 agatagagga gaacctgggg taataggatc acagggagta aagggtgaac ctggagatcc
     1621 cggaccccct ggtttaatag gaagcccagg actaaagggt cagcaaggat ctgcaggctc
     1681 catgggaccc agaggaccgc caggagatgt tggattgcca ggagaacatg gtatcccagg
     1741 aaaacaaggc attaaaggag aaaagggaga tccgggtggg atcataggcc ctcccgggct
     1801 tccaggtcca aaaggtgagg ctggtcctcc agggaaaagc ctgccagggg aaccaggatt
     1861 agatggaaat cctggagcac ctggtccacg tgggccaaag ggtgaaagag gacttccagg
     1921 tgttcacggt tccccagggg acataggccc acaagggata ggaattcctg gcagaacagg
     1981 cgcccaagga ccagctggag agccaggtat tcagggtcct cgaggtctcc ctgggttgcc
     2041 aggaactcca gggactccag ggaatgatgg agttccaggg agagatggaa agccaggcct
     2101 gccaggcccc ccaggtgacc cgattgcact tcctctcttg ggagacatcg gtgctttgct
     2161 caagaatttc tgtggcaact gccaagccag tgtcccaggg ctgaaaagca acaaaggaga
     2221 agaaggaggt gctggtgagc ctggaaagta tgattccatg gcccggaagg gtgatatagg
     2281 gccacggggt cctccaggaa tcccaggaag agagggacca aagggaagca aaggagagcg
     2341 gggctaccct gggatacctg gggagaaagg cgatgagggt cttcaaggaa ttccaggcat
     2401 tccaggtgct ccaggcccga ctggaccccc tggcttaatg ggaagaactg gacatcctgg
     2461 tcccacagga gcaaaaggtg aaaagggcag cgacggaccc cctgggaaac ccggaccacc
     2521 tggaccacct ggtattccat ttaatgaacg aaacggcatg agcagtttat ataaaattaa
     2581 gggaggtgtg aatgttccca gttacccagg gccacccggt cctcctggcc caaaaggcga
     2641 tcctggccca gtgggagagc ctggtgcaat ggggttgcca ggattagaag gatttccagg
     2701 tgtaaaggga gatcgaggcc cagcaggtcc cccaggaata gcagggatgt cgggaaaacc
     2761 tggtgcccca gggcctccag gagttccagg ggaaccgggt gagagaggac ctgttggaga
     2821 tataggtttc cctggaccag aaggaccctc aggaaagcca ggaataaatg gaaaagatgg
     2881 aataccaggt gctcagggca tcatgggtaa gcctggagac agaggcccca aaggagaacg
     2941 tggtgatcag gggattccag gagacagagg ctcacaaggt gaacggggaa aaccaggcct
     3001 tacaggcatg aagggggcca tcggtcctat gggtccacca ggaaacaagg gctccatggg
     3061 atcccctggc caccaaggcc ctccaggctc tccaggcatc cctggcattc cggctgatgc
     3121 agtttcattt gaagaaataa agaagtatat taatcaagag gtcctaagga tttttgaaga
     3181 gaggatggct gtattcctat cccagctcaa gctgccagca gcaatgttgg ctgcccaagc
     3241 ttatgggaga cctgggccac cagggaagga tgggttgcct gggccaccag gagaccctgg
     3301 accccaaggc tacagaggac agaagggaga aagaggtgaa cctggaattg ggctgccagg
     3361 gagtccaggt cttcctggga cttcagctct gggtttgcca ggctcaccag gtgccccagg
     3421 cccacagggc cccccaggac ccagtggaag atgtaaccca gaagattgcc tctatcctgt
     3481 gtctcatgcc catcagcgca caggtgggaa ttgaacacac ctgaagaaga cttggttcct
     3541 ggtaacattt ccttgccact ggagctctc
//