LOCUS BC113099 786 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens C-type lectin domain family 5, member A, mRNA (cDNA clone MGC:135021 IMAGE:40076725), complete cds. ACCESSION BC113099 VERSION BC113099.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 786) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 786) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 18 Row: o Column: 12. FEATURES Location/Qualifiers source 1..786 /db_xref="H-InvDB:HIT000386798" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:135021 IMAGE:40076725" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: NA" gene 1..786 /gene="CLEC5A" /gene_synonym="MDL-1" /gene_synonym="MDL1" /db_xref="GeneID:23601" /db_xref="HGNC:HGNC:2054" /db_xref="MIM:604987" CDS 140..637 /gene="CLEC5A" /gene_synonym="MDL-1" /gene_synonym="MDL1" /codon_start=1 /product="CLEC5A protein" /protein_id="AAI13100.1" /db_xref="GeneID:23601" /db_xref="HGNC:HGNC:2054" /db_xref="MIM:604987" /translation="MNWHMIISGLIVVVLKVVGMTLFLLYFPQIFNKSNDGFTTTRSY GTVCPKDWEFYQARCFFLSTSESSWNESRDFCKGKGSTLAIVNTPEKLKFLQDITDAE KYFIGLIYHREEKRWRWINNSVFNGNVTNQNQNFNCATIGLTKTFDAASCDISYRRIC EKNAK" BASE COUNT 220 a 181 c 169 g 216 t ORIGIN 1 gttgcttggg caaaaggagc atattctcag gagacggggc ccctgcctgc cacaccaagc 61 attaggccac caggaagacc cccatctgca agcaagccta gccttccagg gagaaagagg 121 cccctgcagc tccttcatca tgaactggca catgatcatc tctgggctta ttgtggtagt 181 gcttaaagtt gttggaatga ccttatttct actttatttc ccacagattt ttaacaaaag 241 taacgatggt ttcaccacca ccaggagcta tggaacagtc tgccccaaag actgggaatt 301 ttatcaagca agatgttttt tcttatccac ttctgaatca tcttggaatg aaagcaggga 361 cttttgcaaa ggaaaaggat ccacattggc aattgtcaac acgccagaga aactgaagtt 421 tcttcaggac ataactgatg ctgagaagta ttttattggc ttaatttacc atcgtgaaga 481 gaaaaggtgg cgttggatca acaactctgt gttcaatggc aatgttacca atcagaatca 541 gaatttcaac tgtgcgacca ttggcctaac aaagacattt gatgctgcat catgtgacat 601 cagctaccgc aggatctgtg agaagaatgc caaatgatca cagttccctg tgacaagaac 661 tatacttgca actctttttg aatccataca ggtcgtctgg ccaatgattc ttttacttac 721 ctatctgtct accagtagcg gtccttgccc atttgggaaa ctgagcttct ttcttctgca 781 ctgggg //