LOCUS BC113098 854 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens C-type lectin domain family 5, member A, mRNA (cDNA clone MGC:135020 IMAGE:40076723), complete cds. ACCESSION BC113098 VERSION BC113098.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 854) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 854) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 18 Row: o Column: 11. FEATURES Location/Qualifiers source 1..854 /db_xref="H-InvDB:HIT000386797" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:135020 IMAGE:40076723" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: NA" gene 1..854 /gene="CLEC5A" /gene_synonym="MDL-1" /gene_synonym="MDL1" /db_xref="GeneID:23601" /db_xref="HGNC:HGNC:2054" /db_xref="MIM:604987" CDS 140..706 /gene="CLEC5A" /gene_synonym="MDL-1" /gene_synonym="MDL1" /codon_start=1 /product="C-type lectin domain family 5, member A" /protein_id="AAI13099.1" /db_xref="GeneID:23601" /db_xref="HGNC:HGNC:2054" /db_xref="MIM:604987" /translation="MNWHMIISGLIVVVLKVVGMTLFLLYFPQIFNKSNDGFTTTRSY GTVSQIFGSSSPSPNGFITTRSYGTVCPKDWEFYQARCFFLSTSESSWNESRDFCKGK GSTLAIVNTPEKLKFLQDITDAEKYFIGLIYHREEKRWRWINNSVFNGNVTNQNQNFN CATIGLTKTFDAASCDISYRRICEKNAK" BASE COUNT 240 a 199 c 183 g 232 t ORIGIN 1 gttgcttggg caaaaggagc atattctcag gagacggggc ccctgcctgc cacaccaagc 61 attaggccac caggaagacc cccatctgca agcaagccta gccttccagg gagaaagagg 121 cccctgcagc tccttcatca tgaactggca catgatcatc tctgggctta ttgtggtagt 181 gcttaaagtt gttggaatga ccttatttct actttatttc ccacagattt ttaacaaaag 241 taacgatggt ttcaccacca ccaggagcta tggaacagtc tcacagattt ttgggagcag 301 ttccccaagt cccaacggct tcattaccac aaggagctat ggaacagtct gccccaaaga 361 ctgggaattt tatcaagcaa gatgtttttt cttatccact tctgaatcat cttggaatga 421 aagcagggac ttttgcaaag gaaaaggatc cacattggca attgtcaaca cgccagagaa 481 actgaagttt cttcaggaca taactgatgc tgagaagtat tttattggct taatttacca 541 tcgtgaagag aaaaggtggc gttggatcaa caactctgtg ttcaatggca atgttaccaa 601 tcagaatcag aatttcaact gtgcgacaat tggcctaaca aagacatttg atgctgcatc 661 atgtgacatc agctaccgca ggatctgtga gaagaatgcc aaatgatcac agttccctgt 721 gacaagaact atacttgcaa ctctttttga atccatacag gtcgtctggc caatgattct 781 tttacttacc tatctgtcta ccagtagcgg tccttgccca tttgggaaac tgagcttctt 841 tcttctgcac tggg //