LOCUS BC113091 1481 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens ATG2 autophagy related 2 homolog A (S. cerevisiae),
mRNA (cDNA clone IMAGE:40074255), complete cds.
ACCESSION BC113091
VERSION BC113091.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1481)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1481)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 18 Row: m Column: 20
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1481
/db_xref="H-InvDB:HIT000386791"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40074255"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GGTTAAAC sequenced from the reverse primer"
gene 1..1481
/gene="ATG2A"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
CDS 85..1080
/gene="ATG2A"
/codon_start=1
/product="ATG2A protein"
/protein_id="AAI13092.1"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
/translation="MAVAMVKLCERAGLPLLAAPLLRSLLPRAPQPGPAQPRSVQGQR
CPARHPPGNLVCERGAGVNGVTAGAGGRLRGLHRGGRALGCSAHRPLHSARVRPPAHL
AAPPGSSARGCRLTELGYALNEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDLLWL
PIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQATAETVYDILSPAAPV
SRSLQDKRSARRLRRGQQPADLREGVAKAYDTVREGILDTAQTICDVASRGHEQKGLT
GAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQIVPDAHKDHALKWRSDSAQD"
BASE COUNT 244 a 487 c 483 g 267 t
ORIGIN
1 ctagtgaaca gcggagccgg acggggatcg ccggcgggcg gcaagcggag gcggcccagg
61 cccggcggtc tccgagatgt cacgatggct gtggccatgg tcaaactgtg tgaaagagcg
121 ggtctgccgc tacttgctgc accactactt aggtcacttc ttccaagagc acctcagcct
181 ggaccagctc agcctcgatc tgtacaaggg cagcgttgcc ctgcgagaca tccacctgga
241 aatctggtct gtgaacgagg tgctggagtc aatggagtca ccgctggagc tggtggaagg
301 cttcgtgggc tccatcgagg tggccgtgcc ctgggctgct ctgctcaccg accactgcac
361 agtgcgcgtg tccggcctcc agctcacctt gcagccccgc cggggtccag cgccaggggc
421 tgccgactca cagagctggg ctatgccctc aacgagtggc tgcaggacat ccgcaagaac
481 cagctgcccg gcctgctggg aggcgtgggc cccatgcact cggttgtcca gctcttccaa
541 gggttccggg acctgctgtg gctgcccatt gagcagtaca ggaaggatgg ccgcctcatg
601 cgggggctgc agcgaggggc tgcctccttt ggctcatcca cagcctctgc cgccctggaa
661 ctcagcaacc ggttggtaca ggctatccag gccacagctg agaccgtgta tgacatcctg
721 tccccggcag cccccgtctc ccgctccctg caggataagc gctctgcgcg gaggctgcgc
781 aggggccagc agcctgccga cctgcgggag ggtgtggcca aggcctacga cacagtgcga
841 gagggcatct tggatacagc tcagaccatc tgtgacgtgg catcgcgggg ccatgagcag
901 aaggggctga cgggcgccgt ggggggcgtg atccgccagc tgcccccgac tgtggtgaag
961 ccgctcatcc tggccacgga ggccacgtcc agcctgctcg ggggcatgcg caaccagatt
1021 gtccccgacg cccacaagga ccacgccctc aagtggcgct cggacagtgc ccaagactga
1081 gcctggggtg cccggcaccc agagggtgct gcccaccatg ctcctgagcc tcccaagagc
1141 tgcagcccac gggcccggcc cggcctggcc cttcagggga tggccactgt gaaggacgcc
1201 ttcccagcct gcccgttgcc aatctgctgt gagagggggg cctccctgcc ttggggcctt
1261 agccctggct ctgcactttt cctccgggga gaaaggacac tgcccctccc ccgacctggg
1321 cccacactgc tgccttctcc caggacggag gcttttggac cctcggaccc catcccactc
1381 agccaagtgt ctttctgtgt ctggggggag gaggggatga tatccgtgtg gttcgatgta
1441 ttatttttaa gctccgtgag tgcgtgggtc agtgtctgca t
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