LOCUS BC113090 1620 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens ATG2 autophagy related 2 homolog A (S. cerevisiae),
mRNA (cDNA clone IMAGE:40074253), partial cds.
ACCESSION BC113090
VERSION BC113090.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1620)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1620)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 18 Row: m Column: 19.
FEATURES Location/Qualifiers
source 1..1620
/db_xref="H-InvDB:HIT000386790"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40074253"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CATTTACT sequenced from
the forward primer"
gene 1..>1620
/gene="ATG2A"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
CDS 77..>1620
/gene="ATG2A"
/codon_start=1
/product="ATG2A protein"
/protein_id="AAI13091.1"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
/translation="MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLDQLSLDLYK
GSVALRDIHLEIWSVNEVLESMESPLELVEGFVGSIEVAVPWAALLTDHCTVRVSGLQ
LTLQPRRGPAPGAADSQSWASCMTTSLQLAQECLRDGLPEPSEPPQPLEGLEMFAQTI
ETVLRRIKVTFLDTVVRVEHSPGDGERGVAVEVRVQRLEYCDEAVRDPSQAPPVDVHQ
PPAFLHKLLQLAGVRLHYEELPAQEEPPEPPLQIGSCSGYMELMVKLKQNEAFPGPKL
EVAGQLGSLHLLLTPRQLQQLQELLSAVSLTDHEGLADKLNKSRPLGAEDLWLIEQDL
NQQLQAGAVAEPLSPDPLTNPLLNLDNTDLFFSMAGLTSSVASALSELSLSDVDLASS
VRSDMASRRLSAQARPGLALQGMATVKDAFPACPLPICCERGASLPWGLSPGSALFLR
GERTLPLPRPGPTLLPSPRTEAFGPSDPIPLSQVSFCVWGEEGMISVWFDVLFLSSVS
AWVSVC"
BASE COUNT 281 a 519 c 511 g 309 t
ORIGIN
1 ctagtgaaca gcggagccgg acggggatcg ccggcgggcg gcaagcggag gcggcccagg
61 cccggcggtc tccgagatgt cacgatggct gtggccatgg tcaaactgtg tgaaagagcg
121 ggtctgccgc tacttgctgc accactactt aggtcacttc ttccaagagc acctcagcct
181 ggaccagctc agcctcgatc tgtacaaggg cagcgttgcc ctgcgagaca tccacctgga
241 aatctggtct gtgaacgagg tgctggagtc aatggagtca ccgctggagc tggtggaagg
301 cttcgtgggc tccatcgagg tggccgtgcc ctgggctgct ctgctcaccg accactgcac
361 agtgcgcgtg tccggcctcc agctcacctt gcagccccgc cggggtccag cgccaggggc
421 tgccgactca cagagctggg cctcatgcat gaccacaagc ctgcagctgg cccaggagtg
481 tctgcgggat gggctaccgg agccctctga gccaccacag cccctggagg ggctggagat
541 gtttgcccag accattgaga ctgtgcttcg gaggatcaaa gtgaccttcc tggacactgt
601 cgtgagggtg gagcactctc cgggtgatgg ggaacgtggt gtggccgtcg aggtccgtgt
661 gcagagactg gagtactgtg atgaggcagt gcgggaccca agccaggcgc cgccggtgga
721 tgtgcatcag ccgcctgcct tcctgcacaa gctgctgcag ctggcagggg tccgcctgca
781 ctacgaggag ctcccggcac aggaagagcc tccagagccc cccttgcaga tcggcagctg
841 ctcagggtac atggagctga tggtgaagtt gaagcaaaat gaggccttcc ctggccccaa
901 gttggaggtg gcgggacagc tgggctccct gcacctgctc ctgaccccga ggcagctcca
961 gcaacttcag gaactgctca gcgccgtgag ccttacagac cacgagggcc tggctgacaa
1021 gctgaacaag agccgcccgc taggtgccga agacctgtgg ctgattgagc aggacctgaa
1081 ccagcagctg caggcagggg cagtggctga gcccctcagc ccagaccccc ttaccaaccc
1141 ccttctcaac ctggataaca ctgacctctt cttctccatg gctggcctca caagcagtgt
1201 ggcctcagcc ctctctgagc tctccctctc cgatgtagac ctggcctcct ctgtgcgcag
1261 cgacatggcc tcccgccggc tctctgccca ggcccggccc ggcctggccc ttcaggggat
1321 ggccactgtg aaggacgcct tcccagcctg cccgttgcca atctgctgtg agaggggggc
1381 ctccctgcct tggggcctta gccctggctc tgcacttttc ctccggggag aaaggacact
1441 gcccctcccc cgacctgggc ccacactgct gccttctccc aggacggagg cttttggacc
1501 ctcggacccc atcccactca gccaagtgtc tttctgtgtc tggggggagg aggggatgat
1561 atccgtgtgg ttcgatgtat tatttttaag ctccgtgagt gcgtgggtca gtgtctgcat
//